Detailed information of NKX2-5

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Dataset summary

TF Name: NKX2-5 Species: Homo sapiens
Cell-type/Tissue: BGO3 (embryonic stem cells) Condition/Source: Treatment: no
JASPAR ID: MA0063.2 MA0503.1 Collections: Permissive Robust
References: GEO GSE89457 GSM2372592 GSM2372593 GTRD EXP049256

External links

Models for profile: MA0063.2

Download TFBSs (hg38)

Download TFBSs in BED and FASTA format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser

Summary plots

Models for profile: MA0503.1

Download TFBSs (hg38)

Download TFBSs in BED and FASTA format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser

Summary plots

Statistical details

Model Peak caller Model ID Enrichment Zone TFBSs Score threshold Centrality p-value (log10)
DAMO MACS MA0063.2 90 9892 89.9 -14.1465178739779
DAMO MACS MA0503.1 85 9492 90.4 -14.4665721998125

4 datasets found for the same TF (NKX2-5) in other cell-types/tissues

TF Name Cell-line Condition/Source Collections Species Identifiers JASPAR ID
NKX2-5 embryonic stem cells Treatment: no Permissive Robust Homo sapiens GSE89457 ... MA0063.2 ...
NKX2-5 HL-1 (cardiac muscle cells) Permissive Robust Mus musculus GSE21529 ... MA0063.2 ...
NKX2-5 heart Permissive Robust Mus musculus GSE44574 ... MA0063.2 ...
NKX2-5 E12.5 embryonic heart Permissive Mus musculus GSE70332 ... MA0063.2 ...