Detailed information of NKX2-5

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Dataset summary

TF Name: NKX2-5 Species: Mus musculus
Cell-type/Tissue: HL-1 (cardiac muscle cells) Condition/Source:
JASPAR ID: MA0063.2 MA0503.1 Collections: Permissive Robust
References: GEO GSE21529 GSM558906 GTRD EXP030896 PUBMED 21415370

External links

Models for profile: MA0063.2

Download TFBSs (mm10)

Download TFBSs in BED and FASTA format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser

Summary plots

Models for profile: MA0503.1

Download TFBSs (mm10)

Download TFBSs in BED and FASTA format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser

Summary plots

Statistical details

Model Peak caller Model ID Enrichment Zone TFBSs Score threshold Centrality p-value (log10)
DAMO MACS MA0063.2 98 19694 89.4 -6.8687539447122
DAMO MACS MA0503.1 104 25388 89.1 -11.7788403871777

4 datasets found for the same TF (NKX2-5) in other cell-types/tissues

TF Name Cell-line Condition/Source Collections Species Identifiers JASPAR ID
NKX2-5 embryonic stem cells Treatment: no Permissive Robust Homo sapiens GSE89457 ... MA0063.2 ...
NKX2-5 BGO3 (embryonic stem cells) Treatment: no Permissive Robust Homo sapiens GSE89457 ... MA0063.2 ...
NKX2-5 heart Permissive Robust Mus musculus GSE44574 ... MA0063.2 ...
NKX2-5 E12.5 embryonic heart Permissive Mus musculus GSE70332 ... MA0063.2 ...