Detailed information of NKX2-5

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Dataset summary

TF Name: NKX2-5 Species: Mus musculus
Cell-type/Tissue: E12.5 embryonic heart Condition/Source:
JASPAR ID: MA0063.2 MA0503.1 Collections: Permissive
References: GEO GSE70332 GSM1724109 GTRD EXP035161 PUBMED 26138475

External links

Models for profile: MA0063.2

Download TFBSs (mm10)

Download TFBSs in BED and FASTA format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser

Summary plots

Models for profile: MA0503.1

Download TFBSs (mm10)

Download TFBSs in BED and FASTA format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser

Summary plots

Statistical details

Model Peak caller Model ID Enrichment Zone TFBSs Score threshold Centrality p-value (log10)
DAMO MACS MA0063.2 33 8074 88.5 -8.39306402191348e-11
DAMO MACS MA0503.1 29 7333 91.3 -1.32082123025353e-10

4 datasets found for the same TF (NKX2-5) in other cell-types/tissues

TF Name Cell-line Condition/Source Collections Species Identifiers JASPAR ID
NKX2-5 embryonic stem cells Treatment: no Permissive Robust Homo sapiens GSE89457 ... MA0063.2 ...
NKX2-5 BGO3 (embryonic stem cells) Treatment: no Permissive Robust Homo sapiens GSE89457 ... MA0063.2 ...
NKX2-5 HL-1 (cardiac muscle cells) Permissive Robust Mus musculus GSE21529 ... MA0063.2 ...
NKX2-5 heart Permissive Robust Mus musculus GSE44574 ... MA0063.2 ...