Detailed information of NKX2-5

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Dataset summary

TF Name: NKX2-5 Species: Homo sapiens
Cell-type/Tissue: embryonic stem cells Condition/Source: Treatment: no
JASPAR ID: MA0063.2 MA0503.1 Collections: Permissive Robust
References: GEO GSE89457 GSM2372594 GTRD EXP049255

External links

Models for profile: MA0063.2

Download TFBSs (hg38)

Download TFBSs in BED and FASTA format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser

Summary plots

Models for profile: MA0503.1

Download TFBSs (hg38)

Download TFBSs in BED and FASTA format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser

Summary plots

Statistical details

Model Peak caller Model ID Enrichment Zone TFBSs Score threshold Centrality p-value (log10)
DAMO MACS MA0063.2 96 10460 88.6 -13.8651530029773
DAMO MACS MA0503.1 88 8329 90.7 -10.7670365692728

4 datasets found for the same TF (NKX2-5) in other cell-types/tissues

TF Name Cell-line Condition/Source Collections Species Identifiers JASPAR ID
NKX2-5 BGO3 (embryonic stem cells) Treatment: no Permissive Robust Homo sapiens GSE89457 ... MA0063.2 ...
NKX2-5 HL-1 (cardiac muscle cells) Permissive Robust Mus musculus GSE21529 ... MA0063.2 ...
NKX2-5 heart Permissive Robust Mus musculus GSE44574 ... MA0063.2 ...
NKX2-5 E12.5 embryonic heart Permissive Mus musculus GSE70332 ... MA0063.2 ...