Detailed information of RARB

  1. Home
  2. TF > RARB

Dataset summary

TF Name: RARB Species: Mus musculus
Cell-type/Tissue: brain caudate putamen Condition/Source:
JASPAR ID: MA0857.1 MA0858.1 MA1552.1 Collections: Permissive
References: GEO GSE67829 GSM1656748 GTRD EXP034799 PUBMED 27405468

External links

Models for profile: MA0857.1

Download TFBSs (mm10)

Download TFBSs in BED and FASTA format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser

Summary plots

Models for profile: MA0858.1

Download TFBSs (mm10)

Download TFBSs in BED and FASTA format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser

Summary plots

Models for profile: MA1552.1

Download TFBSs (mm10)

Download TFBSs in BED and FASTA format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser

Summary plots

Statistical details

Model Peak caller Model ID Enrichment Zone TFBSs Score threshold Centrality p-value (log10)
DAMO MACS MA0857.1 3.5 307 80.4 0.0
DAMO MACS MA0858.1 22 1630 79.6 NS
DAMO MACS MA1552.1 28.5 1720 87 NS

4 datasets found for the same TF (RARB) in other cell-types/tissues

TF Name Cell-line Condition/Source Collections Species Identifiers JASPAR ID
RARB liver RA-treatment Permissive Robust Mus musculus GSE53736 ... MA0857.1 ...
RARB MCF12A (human mammary epithelial cells) Treatment: DMSO for 24 hr Permissive Homo sapiens GSE85189 ... MA0857.1 ...
RARB MCF12A (human mammary epithelial cells) Treatment: ATRA for 24 hr Permissive Homo sapiens GSE85189 ... MA0857.1 ...
RARB liver Permissive Mus musculus GSE53736 ... MA0857.1 ...