Detailed information of SREBF2

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Dataset summary

TF Name: SREBF2 Species: Homo sapiens
Cell-type/Tissue: PANC1 (pancreatic ductal adenocarcinoma) Condition/Source: Treatment: Control (pH =7.4);
JASPAR ID: MA0596.1 MA0828.1 Collections: Permissive
References: GEO GSE93982 GSM2466038 GTRD EXP055770 PUBMED 28249167

External links

Models for profile: MA0596.1

Download TFBSs (hg38)

Download TFBSs in BED and FASTA format

Download trained model

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Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser

Summary plots

Models for profile: MA0828.1

Download TFBSs (hg38)

Download TFBSs in BED and FASTA format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser

Summary plots

Statistical details

Model Peak caller Model ID Enrichment Zone TFBSs Score threshold Centrality p-value (log10)
DAMO MACS MA0596.1 117.5 138 91.6 0.0
DAMO MACS MA0828.1 34.5 117 86.3 NS

3 datasets found for the same TF (SREBF2) in other cell-types/tissues

TF Name Cell-line Condition/Source Collections Species Identifiers JASPAR ID
SREBF2 PANC1 (pancreatic ductal adenocarcinoma) Treatment: low pH (pH=6.8); Permissive Homo sapiens GSE93982 ... MA0596.1 ...
SREBF2 GM12878 (female B-cells lymphoblastoid cell line) Permissive Homo sapiens ENCSR000DYT MA0596.1 ...
SREBF2 A549 (lung carcinoma) Permissive Homo sapiens ENCSR638QYO MA0596.1 ...