Detailed information of SREBF2

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Dataset summary

TF Name: SREBF2 Species: Homo sapiens
Cell-type/Tissue: GM12878 (female B-cells lymphoblastoid cell line) Condition/Source:
JASPAR ID: MA0596.1 MA0828.1 Collections: Permissive
References: ENCODE ENCSR000DYT GTRD EXP011140

External links

Models for profile: MA0596.1

Download TFBSs (hg38)

Download TFBSs in BED and FASTA format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser

Summary plots

Models for profile: MA0828.1

Download TFBSs (hg38)

Download TFBSs in BED and FASTA format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser

Summary plots

Statistical details

Model Peak caller Model ID Enrichment Zone TFBSs Score threshold Centrality p-value (log10)
DAMO MACS MA0596.1 28.5 217 92 -0.0538669163215081
DAMO MACS MA0828.1 1.5 15 89.3 0.0

3 datasets found for the same TF (SREBF2) in other cell-types/tissues

TF Name Cell-line Condition/Source Collections Species Identifiers JASPAR ID
SREBF2 PANC1 (pancreatic ductal adenocarcinoma) Treatment: Control (pH =7.4); Permissive Homo sapiens GSE93982 ... MA0596.1 ...
SREBF2 PANC1 (pancreatic ductal adenocarcinoma) Treatment: low pH (pH=6.8); Permissive Homo sapiens GSE93982 ... MA0596.1 ...
SREBF2 A549 (lung carcinoma) Permissive Homo sapiens ENCSR638QYO MA0596.1 ...