Dataset summary
| TF Name: | CCA1 | Species: | Arabidopsis thaliana |
| Cell-type/Tissue: | 14 day old seedling | Condition/Source: | Constant Light after entrainment in 12h:12h Light: Dark; ZT2 |
| JASPAR ID: | MA0972.1 | Collections: | Permissive Robust |
| References: | GEO GSE70533 GSM1808449 GSM1808450 GSM1808451 GTRD EXP041386 PUBMED 26261339 | ||
External links
Statistical details
| Model | Peak caller | Model ID | Enrichment Zone | TFBSs | Score threshold | Centrality p-value (log10) |
|---|---|---|---|---|---|---|
| DAMO | MACS | MA0972.1 | 77.5 | 2047 | 93 | -46.9228216901623 |
4 datasets found for the same TF (CCA1) in other cell-types/tissues
| TF Name | Cell-line | Condition/Source | Collections | Species | Identifiers | JASPAR ID |
|---|---|---|---|---|---|---|
| CCA1 | 14 day old seedling | CCA1pro:CCA1-FLAG cca1 lhy | Permissive | Arabidopsis thaliana | GSE67903 ... | MA0972.1 |
| CCA1 | 14 day old seedling | CCA1pro:CCA1-FLAG cca1 lhy | Permissive | Arabidopsis thaliana | GSE67903 ... | MA0972.1 |
| CCA1 | 14 day old seedling | Constant Light after entrainment in 12h:12h Light: Dark; ZT14 | Permissive | Arabidopsis thaliana | GSE70533 ... | MA0972.1 |
| CCA1 | 14 day old seedling | Diel 12h:12h Light:Dark; ZT2 | Permissive Robust | Arabidopsis thaliana | GSE70533 ... | MA0972.1 |