Dataset summary
TF Name: | CCA1 | Species: | Arabidopsis thaliana |
Cell-type/Tissue: | 14 day old seedling | Condition/Source: | CCA1pro:CCA1-FLAG cca1 lhy |
JASPAR ID: | MA0972.1 | Collections: | Permissive |
References: | GEO GSE67903 GSM1657733 GTRD EXP041368 PUBMED 26941090 |
Statistical details
Model | Peak caller | Model ID | Enrichment Zone | TFBSs | Score threshold | Centrality p-value (log10) |
---|---|---|---|---|---|---|
DAMO | MACS | MA0972.1 | 1.5 | 88 | 95.8 | 0.0 |
4 datasets found for the same TF (CCA1) in other cell-types/tissues
TF Name | Cell-line | Condition/Source | Collections | Species | Identifiers | JASPAR ID |
---|---|---|---|---|---|---|
CCA1 | 14 day old seedling | CCA1pro:CCA1-FLAG cca1 lhy | Permissive | Arabidopsis thaliana | GSE67903 ... | MA0972.1 |
CCA1 | 14 day old seedling | Constant Light after entrainment in 12h:12h Light: Dark; ZT14 | Permissive | Arabidopsis thaliana | GSE70533 ... | MA0972.1 |
CCA1 | 14 day old seedling | Constant Light after entrainment in 12h:12h Light: Dark; ZT2 | Permissive Robust | Arabidopsis thaliana | GSE70533 ... | MA0972.1 |
CCA1 | 14 day old seedling | Diel 12h:12h Light:Dark; ZT2 | Permissive Robust | Arabidopsis thaliana | GSE70533 ... | MA0972.1 |