Detailed information of ATOH1

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Dataset summary

TF Name: ATOH1 Species: Mus musculus
Cell-type/Tissue: Sonic Hedgehog medulloblastoma Condition/Source: Spinal metastatic tumor
JASPAR ID: MA0461.2 MA1467.1 Collections: Permissive
References: GEO GSE98300 GSM2590650 GSM2590655 GTRD EXP038583 PUBMED 28490517

External links

Models for profile: MA0461.2

Download TFBSs (mm10)

Download TFBSs in BED and FASTA format

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Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser

Summary plots

Models for profile: MA1467.1

Download TFBSs (mm10)

Download TFBSs in BED and FASTA format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser

Summary plots

Statistical details

Model Peak caller Model ID Enrichment Zone TFBSs Score threshold Centrality p-value (log10)
DAMO MACS MA0461.2 23.5 121 86.3 0.0
DAMO MACS MA1467.1 13.5 127 85.6 NS

4 datasets found for the same TF (ATOH1) in other cell-types/tissues

TF Name Cell-line Condition/Source Collections Species Identifiers JASPAR ID
ATOH1 Sonic Hedgehog medulloblastoma Primary tumor Permissive Mus musculus GSE98300 ... MA0461.2 ...
ATOH1 cerebellum Permissive Robust Mus musculus GSE22111 ... MA0461.2 ...
ATOH1 colon Permissive Robust Mus musculus GSE82181 ... MA0461.2 ...
ATOH1 distal small intestine Permissive Mus musculus GSE82181 ... MA0461.2 ...