Detailed information of ATOH1

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Dataset summary

TF Name: ATOH1 Species: Mus musculus
Cell-type/Tissue: distal small intestine Condition/Source:
JASPAR ID: MA0461.2 MA1467.1 Collections: Permissive
References: GEO GSE82181 GSM2185706 GSM2185712 GTRD EXP037469 PUBMED 28174757

External links

Models for profile: MA0461.2

Download TFBSs (mm10)

Download TFBSs in BED and FASTA format

Download trained model

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Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser

Summary plots

Models for profile: MA1467.1

Download TFBSs (mm10)

Download TFBSs in BED and FASTA format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser

Summary plots

Statistical details

Model Peak caller Model ID Enrichment Zone TFBSs Score threshold Centrality p-value (log10)
DAMO MACS MA0461.2 92.5 6219 84.7 -32.6981556808325
DAMO MACS MA1467.1 87.5 6369 85.2 -33.6242427698393

4 datasets found for the same TF (ATOH1) in other cell-types/tissues

TF Name Cell-line Condition/Source Collections Species Identifiers JASPAR ID
ATOH1 Sonic Hedgehog medulloblastoma Spinal metastatic tumor Permissive Mus musculus GSE98300 ... MA0461.2 ...
ATOH1 Sonic Hedgehog medulloblastoma Primary tumor Permissive Mus musculus GSE98300 ... MA0461.2 ...
ATOH1 cerebellum Permissive Robust Mus musculus GSE22111 ... MA0461.2 ...
ATOH1 colon Permissive Robust Mus musculus GSE82181 ... MA0461.2 ...