Detailed information of RXRA

Dataset summary

TF Name: RXRA Species: Mus musculus
Cell-type/Tissue: F9 (embryonal carcinoma) Condition/Source: 6hr ATRA
JASPAR ID: MA0065.2 MA0074.1 MA0115.1 MA0159.1 MA0494.1 MA0512.2 MA1146.1 MA1147.1 MA1148.1 Collections: Permissive Robust
References: GEO GSE30538 GSM757796 GTRD EXP000681 PUBMED 21988834

External links

Statistical details

Model Peak caller Model ID Enrichment Zone TFBSs Score threshold Centrality p-value (log10)
DAMO MACS MA0065.2 62 600 86.8 -7.22034702985994
DAMO MACS MA0074.1 60 566 89.5 -5.86724843789084
DAMO MACS MA0115.1 58 584 81 -7.02929853021836
DAMO MACS MA0159.1 45 525 83.6 -9.27646845308132
DAMO MACS MA0494.1 65 713 82.3 -10.7170819914163
DAMO MACS MA0512.2 50.5 613 85 -11.7225851789674
DAMO MACS MA1146.1 47 551 83.9 -9.50461284521285
DAMO MACS MA1147.1 47 542 83.9 -9.2762970394782
DAMO MACS MA1148.1 52.5 519 86.5 -6.56040732887074

99 datasets found for the same TF (RXRA) in other cell-types/tissues

TF Name Cell-line Condition/Source Collections Species Identifiers JASPAR ID
RXRA 3T3-L1 (embryonic fibroblasts) Day 0 of differentiation Permissive Mus musculus GSE13511 ... MA0065.2 ...
RXRA 3T3-L1 (embryonic fibroblasts) Day 1 of differentiation Permissive Mus musculus GSE13511 ... MA0065.2 ...
RXRA 3T3-L1 (embryonic fibroblasts) Day 2 of differentiation Permissive Mus musculus GSE13511 ... MA0065.2 ...
RXRA 3T3-L1 (embryonic fibroblasts) Day 3 of differentiation Permissive Robust Mus musculus GSE13511 ... MA0065.2 ...
RXRA 3T3-L1 (embryonic fibroblasts) Day 4 of differentiation Permissive Robust Mus musculus GSE13511 ... MA0065.2 ...
RXRA 3T3-L1 (embryonic fibroblasts) Day 6 of differentiation Permissive Robust Mus musculus GSE13511 ... MA0065.2 ...
RXRA 3T3-L1-derived preadipocytes 4 hours of differentiation Permissive Mus musculus GSE27826 ... MA0065.2 ...
RXRA F9 (embryonal carcinoma) 48hr ethanol Permissive Robust Mus musculus GSE30538 ... MA0065.2 ...
RXRA F9 (embryonal carcinoma) 2hr ATRA Permissive Robust Mus musculus GSE30538 ... MA0065.2 ...
RXRA F9 (embryonal carcinoma) 24hr ATRA Permissive Robust Mus musculus GSE30538 ... MA0065.2 ...
RXRA F9 (embryonal carcinoma) 48hr ATRA Permissive Mus musculus GSE30538 ... MA0065.2 ...
RXRA F9 (embryonal carcinoma) 48hr ATRA, RXRa KO Permissive Mus musculus GSE30538 ... MA0065.2 ...
RXRA NB4 (acute promyelocytic leukemia ) 24 hours ATRA Permissive Homo sapiens GSE18886 ... MA0065.2 ...
RXRA UPR9 (hematopoietic stem cells) 5 hours zinc Permissive Robust Homo sapiens GSE18886 ... MA0065.2 ...
RXRA liver Bexarotene Permissive Robust Mus musculus GSE35262 ... MA0065.2 ...
RXRA liver Control Permissive Robust Mus musculus GSE35262 ... MA0065.2 ...
RXRA liver T0901317 Permissive Robust Mus musculus GSE35262 ... MA0065.2 ...
RXRA liver Bexarotene Permissive Robust Mus musculus GSE35262 ... MA0065.2 ...
RXRA liver Control Permissive Robust Mus musculus GSE35262 ... MA0065.2 ...
RXRA liver T0901317 Permissive Robust Mus musculus GSE35262 ... MA0065.2 ...
RXRA liver RA-treatment Permissive Robust Mus musculus GSE53736 ... MA0065.2 ...
RXRA MC3T3-E1 (preosteoblasts) ethanol vehicle Permissive Mus musculus GSE51513 ... MA0065.2 ...
RXRA MC3T3-E1 (preosteoblasts) 100nM 1,25(OH)2D3 Permissive Mus musculus GSE51513 ... MA0065.2 ...
RXRA MC3T3-E1 (preosteoblasts) ethanol vehicle Permissive Mus musculus GSE51513 ... MA0065.2 ...
RXRA MC3T3-E1 (preosteoblasts) 100nM 1,25(OH)2D3 Permissive Mus musculus GSE51513 ... MA0065.2 ...
RXRA IDG-SW3 (bone cells) 100nM 1,25(OH)2D3 for 3 hours Permissive Robust Mus musculus GSE54782 ... MA0065.2 ...
RXRA F9 (embryonal carcinoma) all-trans retinoic acid 2h Permissive Robust Mus musculus GSE56893 ... MA0065.2 ...
RXRA F9 (embryonal carcinoma) all-trans retinoic acid 24h Permissive Robust Mus musculus GSE56893 ... MA0065.2 ...
RXRA F9 (embryonal carcinoma) all-trans retinoic acid 48h Permissive Robust Mus musculus GSE56893 ... MA0065.2 ...
RXRA E14TG2A (embryonic stem cells) 1um Retinoic Acid (RA) for 48hrs Permissive Mus musculus GSE65695 ... MA0065.2 ...
RXRA F9 (embryonal carcinoma) EtOH Permissive Mus musculus GSE68540 ... MA0065.2 ...
RXRA F9 (embryonal carcinoma) ATRA 2h Permissive Robust Mus musculus GSE68540 ... MA0065.2 ...
RXRA F9 (embryonal carcinoma) ATRA 6h Permissive Robust Mus musculus GSE68540 ... MA0065.2 ...
RXRA F9 (embryonal carcinoma) ATRA 24h Permissive Robust Mus musculus GSE68540 ... MA0065.2 ...
RXRA F9 (embryonal carcinoma) ATRA 48h Permissive Robust Mus musculus GSE68540 ... MA0065.2 ...
RXRA P19 (embryonic carcinoma) EtOH Permissive Mus musculus GSE68540 ... MA0065.2 ...
RXRA P19 (embryonic carcinoma) ATRA 2h Permissive Mus musculus GSE68540 ... MA0065.2 ...
RXRA P19 (embryonic carcinoma) ATRA 6h Permissive Mus musculus GSE68540 ... MA0065.2 ...
RXRA P19 (embryonic carcinoma) ATRA 24h Permissive Mus musculus GSE68540 ... MA0065.2 ...
RXRA P19 (embryonic carcinoma) ATRA 48h Permissive Robust Mus musculus GSE68540 ... MA0065.2 ...
RXRA bone marrow-derived mesenchymal stem cells 1,25(OH)2D3 Permissive Robust Mus musculus GSE79813 ... MA0065.2 ...
RXRA bone marrow-derived mesenchymal stem cells osteogenic media day 7 Permissive Mus musculus GSE79813 ... MA0065.2 ...
RXRA bone marrow-derived mesenchymal stem cells 1,25(OH)2D3 + osteogenic media day 7 Permissive Mus musculus GSE79813 ... MA0065.2 ...
RXRA bone marrow-derived mesenchymal stem cells osteogenic media day 15 Permissive Mus musculus GSE79813 ... MA0065.2 ...
RXRA bone marrow-derived mesenchymal stem cells 1,25(OH)2D3 + osteogenic media day 15 Permissive Mus musculus GSE79813 ... MA0065.2 ...
RXRA bone marrow-derived mesenchymal stem cells adipose media day 7 Permissive Robust Mus musculus GSE79813 ... MA0065.2 ...
RXRA bone marrow-derived mesenchymal stem cells 1,25(OH)2D3 + adipose media day 7 Permissive Robust Mus musculus GSE79813 ... MA0065.2 ...
RXRA monocyte-derived macrophages untreated Permissive Robust Homo sapiens GSE100889 ... MA0065.2 ...
RXRA monocyte-derived macrophages IL-4 Permissive Homo sapiens GSE100889 ... MA0065.2 ...
RXRA embryonic stem cells GW3965 for 24 h Permissive Mus musculus GSE101768 ... MA0065.2 ...
RXRA embryonic stem cells LG268 for 24 h Permissive Robust Mus musculus GSE101768 ... MA0065.2 ...
RXRA embryonic stem cells RA for 24 h Permissive Mus musculus GSE101768 ... MA0065.2 ...
RXRA liver calorie restricted diet Permissive Robust Mus musculus GSE47954 ... MA0065.2 ...
RXRA liver high-fat diet Permissive Robust Mus musculus GSE47954 ... MA0065.2 ...
RXRA liver calorie restricted diet Permissive Robust Mus musculus GSE47954 ... MA0065.2 ...
RXRA liver high-fat diet Permissive Robust Mus musculus GSE47954 ... MA0065.2 ...
RXRA bone marrow-derived macrophages 1h IL4 Permissive Mus musculus GSE107456 ... MA0074.1 ...
RXRA bone marrow-derived macrophages STAT6_KO Permissive Robust Mus musculus GSE107456 ... MA0065.2 ...
RXRA bone marrow-derived macrophages PPARG_KO Permissive Robust Mus musculus GSE107456 ... MA0065.2 ...
RXRA JMSU-1 (Bladder carcinoma) genotype: RXRA WT Permissive Robust Homo sapiens GSE107734 ... MA0065.2 ...
RXRA JMSU-1 (Bladder carcinoma) genotype: RXRA S427F Permissive Robust Homo sapiens GSE107734 ... MA0065.2 ...
RXRA C2C12 (myoblasts) 50 nM bexarotene for 24 hrs Permissive Mus musculus GSE94558 ... MA0065.2 ...
RXRA MCF7 (Invasive ductal breast carcinoma) Treatment: none; Permissive Robust Homo sapiens GSE41561 ... MA0065.2 ...
RXRA HepG2 (hepatoblastoma) Permissive Robust Homo sapiens ENCSR000BHU MA0512.2
RXRA GM12878 (female B-cells lymphoblastoid cell line) Permissive Robust Homo sapiens ENCSR000BJD MA0512.2
RXRA WA01 (H1, human embryonic stem cells) Permissive Robust Homo sapiens ENCSR000BJW MA0512.2
RXRA SK-N-SH (neuroblastoma) Permissive Robust Homo sapiens ENCSR000BVG MA0512.2
RXRA liver Permissive Robust Homo sapiens ENCSR352QSB MA0065.2 ...
RXRA liver Permissive Robust Homo sapiens ENCSR098XMN MA0065.2 ...
RXRA NB4 (acute promyelocytic leukemia ) Permissive Robust Homo sapiens GSE18886 ... MA0065.2 ...
RXRA acute promyelocytic leukemia blasts Permissive Homo sapiens GSE18886 ... MA0065.2 ...
RXRA acute promyelocytic leukemia blasts Permissive Homo sapiens GSE18886 ... MA0065.2 ...
RXRA UPR9 (hematopoietic stem cells) Permissive Homo sapiens GSE18886 ... MA0065.2 ...
RXRA F9 (embryonal carcinoma) Permissive Robust Mus musculus GSE32332 ... MA0065.2 ...
RXRA F9 (embryonal carcinoma) Permissive Mus musculus GSE32332 ... MA0065.2 ...
RXRA F9 (embryonal carcinoma) Permissive Robust Mus musculus GSE32332 ... MA0065.2 ...
RXRA C17.2a (neural progenitors) Permissive Robust Mus musculus GSE38347 ... MA0065.2 ...
RXRA liver Permissive Robust Mus musculus GSE46762 ... MA0065.2 ...
RXRA liver Permissive Robust Mus musculus GSE53736 ... MA0065.2 ...
RXRA liver Permissive Robust Mus musculus GSE21696 ... MA0065.2 ...
RXRA liver Permissive Robust Mus musculus GSE21696 ... MA0065.2 ...
RXRA liver Permissive Robust Mus musculus GSE21696 ... MA0065.2 ...
RXRA liver Permissive Robust Mus musculus GSE21696 ... MA0065.2 ...
RXRA liver Permissive Robust Mus musculus GSE21696 ... MA0065.2 ...
RXRA liver Permissive Robust Mus musculus GSE21696 ... MA0065.2 ...
RXRA liver Permissive Robust Mus musculus GSE21696 ... MA0065.2 ...
RXRA liver Permissive Robust Mus musculus GSE21696 ... MA0065.2 ...
RXRA IDG-SW3 (bone cells) Permissive Robust Mus musculus GSE54782 ... MA0065.2 ...
RXRA F9 (embryonal carcinoma) Permissive Robust Mus musculus GSE56893 ... MA0065.2 ...
RXRA peritoneal macrophages Permissive Robust Mus musculus GSE63696 ... MA0065.2 ...
RXRA E14TG2A (embryonic stem cells) Permissive Mus musculus GSE65695 ... MA0065.2 ...
RXRA bone marrow-derived mesenchymal stem cells Permissive Robust Mus musculus GSE79813 ... MA0065.2 ...
RXRA embryonic stem cells Permissive Mus musculus GSE101768 ... MA1147.1
RXRA embryonic stem cells Permissive Robust Mus musculus GSE101768 ... MA0074.1 ...
RXRA bone marrow-derived macrophages Permissive Mus musculus GSE107456 ... MA0494.1
RXRA bone marrow-derived macrophages Permissive Robust Mus musculus GSE107456 ... MA0065.2 ...
RXRA bone marrow-derived macrophages Permissive Robust Mus musculus GSE107456 ... MA0065.2 ...
RXRA C2C12 (myoblasts) Permissive Mus musculus GSE94558 ... MA0065.2 ...
RXRA Permissive Homo sapiens GSE41561 MA0512.2