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TFBS extraction
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Enrichment Analysis
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Examples:
LFY
ESC
CTCF
MA0590.1
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Species:
All species
Homo sapiens
Mus musculus
TF name:
All TFs
SRF
Data source:
All sources
ENCODE
GEO
GTRD
PUBMED
Collection:
All collections
Permissive
Robust
Has log(p-value) below defined centrality threshold
Select a species to show cell lines.
57
datasets found
Permissive
Robust
Download
Download all 57 datasets as table
Download as table with one record per matrix profile
Download BED files with metadata
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250
profiles
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Processing...
TF Name
Cell-line
Condition/Source
Collections
Species
Identifiers
JASPAR ID
SRF
HepG2 (hepatoblastoma)
Permissive
Robust
Homo sapiens
ENCSR000BLV
MA0083.3
SRF
GM12878 (female B-cells lymphoblastoid cell line)
Permissive
Robust
Homo sapiens
ENCSR000BMI
MA0083.3
SRF
HCT-116 (colon carcinoma)
Permissive
Robust
Homo sapiens
ENCSR000BSC
MA0083.3
SRF
Ishikawa (endometrial adenocarcinoma)
Permissive
Robust
Homo sapiens
ENCSR000BTD
MA0083.3
SRF
MCF7 (Invasive ductal breast carcinoma)
Permissive
Robust
Homo sapiens
ENCSR000BVA
MA0083.3
SRF
HL-1 (cardiac muscle cells)
Permissive
Mus musculus
GSE19065
...
MA0083.3
SRF
myocytes
Permissive
Robust
Mus musculus
ENCSR000AIM
...
MA0083.3
SRF
HL-1 (cardiac muscle cells)
Permissive
Robust
Mus musculus
GSE21529
...
MA0083.3
SRF
cornea
Permissive
Robust
Mus musculus
GSE54209
...
MA0083.3
SRF
embryonic fibroblasts
Permissive
Mus musculus
GSE71708
...
MA0083.3
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