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TFBS extraction
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Enrichment Analysis
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Examples:
LFY
ESC
CTCF
MA0590.1
Advanced Options
Species:
All species
Danio rerio
Homo sapiens
Mus musculus
TF name:
All TFs
OCT4
POU5F1
SOX2
Data source:
All sources
ENCODE
GEO
GTRD
PUBMED
Collection:
All collections
Permissive
Robust
Has log(p-value) below defined centrality threshold
Select a species to show cell lines.
278
datasets found
Permissive
Robust
Download
Download all 278 datasets as table
Download as table with one record per matrix profile
Download BED files with metadata
Download FASTA files with metadata
Display
10
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250
profiles
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Processing...
TF Name
Cell-line
Condition/Source
Collections
Species
Identifiers
JASPAR ID
SOX2
NIH 3T3 (embryonic fibroblasts)
Genotype: Overexpression of SOX2; Treatment: treated overnight with 500 ng/ml of Doxycycline one day after seeding;
Permissive
Robust
Mus musculus
GSE119782
...
MA0142.1
...
SOX2
hippocamus-derived neural progenitor cells
Strain: mixed C57BL/6 x DBA; Source: hippocamus;
Permissive
Mus musculus
GSE90559
...
MA0142.1
...
SOX2
hippocamus-derived neural progenitor cells
Strain: mixed C57BL/6 x DBA; Source: hippocamus;
Permissive
Mus musculus
GSE90559
...
MA0142.1
...
SOX2
embryonic stem cells
Permissive
Robust
Mus musculus
GSE11724
...
MA0142.1
...
SOX2
LN229 (glioblastoma)
Permissive
Homo sapiens
GSE23795
...
MA0142.1
...
SOX2
embryonic stem cells
Permissive
Robust
Mus musculus
GSE11431
...
MA0142.1
...
SOX2
embryonic stem cells
Permissive
Robust
Mus musculus
GSE44286
...
MA0142.1
...
SOX2
embryonic stem cells
Permissive
Robust
Mus musculus
GSE35496
...
MA0142.1
...
SOX2
embryonic stem cells
Permissive
Robust
Mus musculus
GSE35496
...
MA0142.1
...
SOX2
neural progenitors
Permissive
Mus musculus
GSE35496
...
MA0142.1
...
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