Detailed information of CDX2

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Dataset summary

TF Name: CDX2 Species: Mus musculus
Cell-type/Tissue: E16.5 whole embryonic mouse skin Condition/Source: Strain: CD1; Developmental stage: E17.5;
JASPAR ID: MA0465.2 Collections: Permissive Robust
References: GEO GSE115314 GSM3175484 GSM3175485 GTRD EXP058136 PUBMED 30745430

External links

Models for profile: MA0465.2

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Summary plots

Statistical details

Model Peak caller Model ID Enrichment Zone TFBSs Score threshold Centrality p-value (log10)
DAMO MACS MA0465.2 3.5 15 94.6 -6.64699111341871

30 datasets found for the same TF (CDX2) in other cell-types/tissues

TF Name Cell-line Condition/Source Collections Species Identifiers JASPAR ID
CDX2 Ainv15 (embryonic stem cells) +RA +Hh +Dox +FGF Permissive Robust Mus musculus GSE39433 ... MA0465.2
CDX2 Ainv15 (embryonic stem cells) +RA +Hh +Dox Permissive Robust Mus musculus GSE39433 ... MA0465.2
CDX2 Ainv15 (embryonic stem cells) +Dox +FGF Permissive Robust Mus musculus GSE39435 ... MA0465.2
CDX2 Ainv15 (embryonic stem cells) +Dox +FGF Permissive Robust Mus musculus GSE39435 ... MA0465.2
CDX2 motor neuron progenitors none Permissive Mus musculus GSE39435 ... MA0465.2
CDX2 epiblast stem cells 24h CHIR99021 + Fgf8 Permissive Robust Mus musculus GSE84899 ... MA0465.2
CDX2 jejunal epithelial cells Treatment: injected with 1mg Tamoxifen for 5 consecutive days Genotype: Cdx2 f/f (cdx2 knockout) Villin-cre Strain: B6, 129 mixed background Source: Mouse intestinal villus epithelial cells Cell type: Adult differentiated jejunal epithelial cell, middle 1/3 of intestine Permissive Mus musculus GSE98724 ... MA0465.2
CDX2 jejunal epithelial cells Treatment: sunflower oil (vehicle for tamoxifen) Genotype: wildtype (Cdx2 f/f (cdx2 knockout)) Strain: B6, 129 mixed background Source: Mouse intestinal villus epithelial cells Cell type: Adult differentiated jejunal epithelial cell, middle 1/3 of intestine Permissive Robust Mus musculus GSE98724 ... MA0465.2
CDX2 embryonic whole tissue from midgut Strain: C57BL6; Developmental stage: E16.5; Genotype: Wild-Type(Cdx2 f/f; vil-Cre-ERT2 X Cdx2 f/f; vil-Cre-ERT2); Permissive Robust Mus musculus GSE115314 ... MA0465.2
CDX2 embryonic whole tissue from midgut Strain: CD1; Developmental stage: E17.5; Permissive Robust Mus musculus GSE115314 ... MA0465.2
CDX2 villus epithelium Strain: mixed; Developmental stage: adult; Permissive Robust Mus musculus GSE115314 ... MA0465.2
CDX2 duodenal cells Treatment: none; Genotype: wildtype; Donor: patient 1; Permissive Homo sapiens GSE115314 ... MA0465.2
CDX2 duodenal cells Treatment: none; Genotype: wildtype; Donor: patient 2; Permissive Homo sapiens GSE115314 ... MA0465.2
CDX2 Wnt+Fgf-specified intestinal culture cells Genotype: wildtype; Permissive Robust Homo sapiens GSE115314 ... MA0465.2
CDX2 naive endoderm Treatment: Doxycycline; Genotype: wildtype; Source: induced CDX2 culture cells; Permissive Robust Homo sapiens GSE115314 ... MA0465.2
CDX2 NIH 3T3 (embryonic fibroblasts) Genotype: Overexpression of CDX2; Treatment: treated overnight with 500 ng/ml of Doxycycline one day after seeding; Permissive Robust Mus musculus GSE119782 ... MA0465.2
CDX2 embryo Genotype: wildtype; Developmental stage: E8.5; Strain: Mixed; Source: whole embryo; Permissive Mus musculus GSE128858 ... MA0465.2
CDX2 intestinal villus Permissive Robust Mus musculus GSE24633 ... MA0465.2
CDX2 villus Permissive Mus musculus GSE34566 ... MA0465.2
CDX2 villus Permissive Robust Mus musculus GSE34566 ... MA0465.2
CDX2 ZHBTc4-TS (trophoblast stem cells) Permissive Robust Mus musculus GSE51511 ... MA0465.2
CDX2 endodermal cells Permissive Robust Mus musculus GSE39435 ... MA0465.2
CDX2 intestinal stem cells Permissive Robust Mus musculus GSE70766 ... MA0465.2
CDX2 HUES64 (embryonic stem cells) Permissive Robust Homo sapiens GSE61475 ... MA0465.2
CDX2 LS174T (colon adenocarcinoma) Permissive Robust Homo sapiens GSE97273 ... MA0465.2
CDX2 COLO-320 (colon adenocarcinoma) Permissive Robust Homo sapiens GSE30026 MA0465.2
CDX2 Caco-2 (colon adenocarcinoma) DIFF Permissive Homo sapiens GSE23436 MA0465.2
CDX2 Caco-2 (colon adenocarcinoma) PROLIF Permissive Robust Homo sapiens GSE23436 MA0465.2
CDX2 LS180 (colon cancer) 125 Permissive Robust Homo sapiens GSE31939 MA0465.2
CDX2 LS180 (colon cancer) Permissive Robust Homo sapiens GSE31939 MA0465.2