Detailed information of GFI1

  1. Home
  2. TF > GFI1

Dataset summary

TF Name: GFI1 Species: Mus musculus
Cell-type/Tissue: murine medulloblastoma tumor Condition/Source: Strain: C57BL/6
JASPAR ID: MA0038.2 Collections: Permissive
References: GEO GSE123870 GSM3514939 GSM3514940 GTRD EXP053704

External links

Models for profile: MA0038.2

Download TFBSs (mm10)

Download TFBSs in BED and FASTA format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser

Summary plots

Statistical details

Model Peak caller Model ID Enrichment Zone TFBSs Score threshold Centrality p-value (log10)
DAMO MACS MA0038.2 16.5 3932 81.9 0.0

13 datasets found for the same TF (GFI1) in other cell-types/tissues

TF Name Cell-line Condition/Source Collections Species Identifiers JASPAR ID
GFI1 embryonic stem cell-derived hematopoietic progenitors none Permissive Robust Mus musculus GSE69099 ... MA0038.2
GFI1 CD4+ T-cells Gfi1 KO Permissive Mus musculus GSE70893 ... MA0038.2
GFI1 neurosphere cells p53-/-; p18-/- Permissive Mus musculus GSE84761 ... MA0038.2
GFI1 neurosphere cells p53-/-; p18-/- Permissive Mus musculus GSE84761 ... MA0038.2
GFI1 AML (monocytes and acute myeloid leukemia) Treatment: DMSo vehicle Permissive Robust Homo sapiens GSE90769 ... MA0038.2
GFI1 AML (monocytes and acute myeloid leukemia) Treatment: LSD1 inhibitor OG86 Permissive Robust Homo sapiens GSE90769 ... MA0038.2
GFI1 mast cells Permissive Robust Mus musculus GSE42518 ... MA0038.2
GFI1 bone marrow progenitors Permissive Mus musculus GSE31657 ... MA0038.2
GFI1 innate type-2 lymphocytes Permissive Mus musculus GSE50806 ... MA0038.2
GFI1 granulocyte macrophage progenitors Permissive Mus musculus GSE70237 ... MA0038.2
GFI1 CD4+ T-cells Permissive Mus musculus GSE70893 ... MA0038.2
GFI1 Hoxb8-FL Permissive Robust Mus musculus GSE84328 ... MA0038.2
GFI1 Kasumi-1 (acute myeloblastic leukemia) Permissive Homo sapiens GSE103255 ... MA0038.2