Detailed information of ERF

  1. Home
  2. TF > ERF

Dataset summary

TF Name: ERF Species: Mus musculus
Cell-type/Tissue: embryonic stem cells Condition/Source: Genotype: ERF knockout, (H-Ras-/-;N-Ras-/-;K-Raslox/lox;RERTert/ert) Treatment: no for at least 7days Background: cell line RAS lox/lox
JASPAR ID: MA0760.1 Collections: Permissive
References: GEO GSE99476 GSM2644546 GTRD EXP052477 PUBMED 29650524

External links

Models for profile: MA0760.1

Download TFBSs (mm10)

Download TFBSs in BED and FASTA format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser

Summary plots

Statistical details

Model Peak caller Model ID Enrichment Zone TFBSs Score threshold Centrality p-value (log10)
DAMO MACS MA0760.1 27.5 7 89.4 0.0

14 datasets found for the same TF (ERF) in other cell-types/tissues

TF Name Cell-line Condition/Source Collections Species Identifiers JASPAR ID
ERF embryonic fibroblasts starved Permissive Mus musculus GSE42936 ... MA0760.1
ERF embryonic fibroblasts exponential Permissive Mus musculus GSE42936 ... MA0760.1
ERF embryonic stem cells Genotype: ERF wildtype, (H-Ras-/-;N-Ras-/-;K-Raslox/lox;RERTert/ert) Treatment: 4-hydroxy-tamoxifen for at least 7days Background: cell line RAS lox/lox Permissive Mus musculus GSE99476 ... MA0760.1
ERF embryonic stem cells Genotype: ERF wildtype, (H-Ras-/-;N-Ras-/-;K-Raslox/lox;RERTert/ert) Treatment: 4-hydroxy-tamoxifen for at least 7days Background: cell line RAS lox/lox Permissive Robust Mus musculus GSE99476 ... MA0760.1
ERF embryonic stem cells Treatment: no Genotype: ERF wildtype, (H-Ras-/-;N-Ras-/-;K-Raslox/lox;RERTert/ert) Background: cell line RAS lox/lox Permissive Mus musculus GSE99476 ... MA0760.1
ERF embryonic stem cells Treatment: no Genotype: ERF wildtype, (H-Ras-/-;N-Ras-/-;K-Raslox/lox;RERTert/ert) Background: cell line RAS lox/lox Permissive Mus musculus GSE99476 ... MA0760.1
ERF embryonic stem cells Genotype: ERF knockout, (H-Ras-/-;N-Ras-/-;K-Raslox/lox;RERTert/ert) Treatment: no for at least 7days Background: cell line RAS lox/lox Permissive Mus musculus GSE99476 ... MA0760.1
ERF prostate organoids Treatment: vehicle; Permissive Robust Mus musculus GSE98808 ... MA0760.1
ERF prostate organoids Treatment: vehicle; Permissive Mus musculus GSE98808 ... MA0760.1
ERF prostate organoids Treatment: 100ng/mL doxycycline; Permissive Mus musculus GSE98808 ... MA0760.1
ERF prostate organoids Treatment: 100ng/mL doxycycline; Permissive Mus musculus GSE98808 ... MA0760.1
ERF HepG2 (hepatoblastoma) Permissive Homo sapiens ENCSR159DQO MA0760.1
ERF VCaP (prostate carcinoma) Permissive Robust Homo sapiens GSE98809 ... MA0760.1
ERF VCaP (prostate carcinoma) Permissive Robust Homo sapiens GSE98809 ... MA0760.1