Detailed information of PRDM1

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Dataset summary

TF Name: PRDM1 Species: Mus musculus
Cell-type/Tissue: Differentiated trophoblast stem cells Condition/Source: Genotype: wildtype clone1 Strain: C57Bl6/J;129/SvEv Source: Day 2 differentiated trophoblast stem cells
JASPAR ID: MA0508.3 Collections: Permissive Robust
References: GEO GSE74408 GSM1919870 GTRD EXP051580 PUBMED 28754907

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Models for profile: MA0508.3

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Summary plots

Statistical details

Model Peak caller Model ID Enrichment Zone TFBSs Score threshold Centrality p-value (log10)
DAMO MACS MA0508.3 46 335 91.1 -69.6597210310316

24 datasets found for the same TF (PRDM1) in other cell-types/tissues

TF Name Cell-line Condition/Source Collections Species Identifiers JASPAR ID
PRDM1 small intestine expressing Blimp-1-eGFP fusion protein Permissive Robust Mus musculus GSE66069 ... MA0508.3
PRDM1 Th17-cells 9 day in vitro culture for Th17 cells, growth protocol1 Permissive Mus musculus GSE75724 ... MA0508.3
PRDM1 CD4+ T-cells 3 day in vitro culture for Treg, growth protocol 2 Permissive Mus musculus GSE75724 ... MA0508.3
PRDM1 HUES64 (embryonic stem cells) HUES64 dEN Permissive Robust Homo sapiens GSE61475 ... MA0508.3
PRDM1 Differentiated trophoblast stem cells Genotype: wildtype clone2 Strain: C57Bl6/J;129/SvEv Source: Day 2 trophoblast giant cells Permissive Robust Mus musculus GSE74408 ... MA0508.3
PRDM1 Differentiated trophoblast stem cells Genotype: mutant clone Strain: C57Bl6/J;129/SvEv Source: Day 2 trophoblast giant cells Permissive Mus musculus GSE74408 ... MA0508.3
PRDM1 primordial germ cell Characteristic: cell sorting FACS (SSEA1+) Sex: male Genotype: Homozygous EGFP-knocked-in at the N terminus of BLIMP1 (EGFP-BLIMP1) Age: E12.5 Strain: C57BL/6 Permissive Robust Mus musculus GSE91038 ... MA0508.3
PRDM1 primordial germ cell Characteristic: cell sorting FACS (SSEA1+) Sex: female Genotype: Homozygous EGFP-knocked-in at the N terminus of BLIMP1 (EGFP-BLIMP1) Age: E12.5 Strain: C57BL/6 Permissive Robust Mus musculus GSE91038 ... MA0508.3
PRDM1 primordial germ cell Characteristic: cell sorting FACS (KIT+) Genotype: Homozygous EGFP-knocked-in at the N terminus of BLIMP1 (EGFP-BLIMP1) Age: E6.5 Strain: C57BL/6 Permissive Robust Mus musculus GSE91038 ... MA0508.3
PRDM1 primordial germ cell Characteristic: cell sorting FACS (KIT+) Genotype: Homozygous EGFP-knocked-in at the N terminus of BLIMP1 (EGFP-BLIMP1) Age: E9.5 Strain: C57BL/6 Permissive Robust Mus musculus GSE91038 ... MA0508.3
PRDM1 embryonic intestinal epithelium Characteristic: cell sorting FACS (GFP+, EPCAM+) Genotype: Homozygous EGFP-knocked-in at the N terminus of BLIMP1 (EGFP-BLIMP1) Strain: C57BL/6 Permissive Robust Mus musculus GSE91038 ... MA0508.3
PRDM1 photoreceptor precursor Characteristic: cell sorting FACS (GFP+) Genotype: Homozygous EGFP-knocked-in at the N terminus of BLIMP1 (EGFP-BLIMP1) Strain: C57BL/6 Permissive Robust Mus musculus GSE91038 ... MA0508.3
PRDM1 plasmablasts Characteristic: cell sorting FACS (GFP+, CD138+) Genotype: Homozygous EGFP-knocked-in at the N terminus of BLIMP1 (EGFP-BLIMP1) Strain: C57BL/6 Permissive Robust Mus musculus GSE91038 ... MA0508.3
PRDM1 In-vitro, Pro-B cell culture Genotype: Prdm1(IhCd2/+) Strain: C57BL/6 Permissive Robust Mus musculus GSE111692 ... MA0508.3
PRDM1 HeLa S3 (cervical adenocarcinoma) Permissive Robust Homo sapiens ENCSR000ECY MA0508.3
PRDM1 T-cells Permissive Mus musculus GSE48358 ... MA0508.3
PRDM1 plasmablasts Permissive Robust Mus musculus GSE71698 ... MA0508.3
PRDM1 HEK293 (embryonic kidney) Permissive Robust Homo sapiens GSE76494 ... MA0508.3
PRDM1 CD8+ T-cells Permissive Robust Mus musculus GSE79339 ... MA0508.3
PRDM1 HUES64 (embryonic stem cells) Permissive Robust Homo sapiens GSE61475 ... MA0508.3
PRDM1 HUES64 (embryonic stem cells) Permissive Robust Homo sapiens GSE61475 ... MA0508.3
PRDM1 HUES64 (embryonic stem cells) Permissive Robust Homo sapiens GSE61475 ... MA0508.3
PRDM1 HEK293 (embryonic kidney) Permissive Robust Homo sapiens ENCSR098YLE MA0508.3
PRDM1 U266 (plasma cell myeloma) Permissive Robust Homo sapiens GSE102360 ... MA0508.3