Detailed information of MYOD1

Dataset summary

TF Name: MYOD1 Species: Mus musculus
Cell-type/Tissue: C2C12 (myoblasts) Condition/Source: Day: 2 of differentiation Celltype: myoblast Genotype: siRNA-mediated knockdown of Myolinc Treatment: transient siRNA transfection (10nM final concentration) was carried out using RNAiMax (Life Technologies) according to the manufacturer’s protocol
JASPAR ID: MA0499.2 Collections: Permissive
References: GEO GSE69527 GSM1702885 GTRD EXP051558 PUBMED 29618024

External links

Statistical details

Model Peak caller Model ID Enrichment Zone TFBSs Score threshold Centrality p-value (log10)
DAMO MACS MA0499.2 5 2236 83.8 0.0

37 datasets found for the same TF (MYOD1) in other cell-types/tissues

TF Name Cell-line Condition/Source Collections Species Identifiers JASPAR ID
MYOD1 myocytes 10 hours in differentiating medium Permissive Mus musculus GSE24852 ... MA0499.2
MYOD1 myotube 48 hours in differentiating medium Permissive Mus musculus GSE24852 ... MA0499.2
MYOD1 P19 (embryonic carcinoma) MyoD transduction Permissive Mus musculus GSE64626 ... MA0499.2
MYOD1 P19 (embryonic carcinoma) MyoD transduction Permissive Mus musculus GSE64626 ... MA0499.2
MYOD1 C2C12 (myoblasts) day3 of differentiation Permissive Mus musculus GSE80812 ... MA0499.2
MYOD1 C2C12 (myoblasts) day3 of differentiation, KLF5 KO Permissive Mus musculus GSE80812 ... MA0499.2
MYOD1 C2C12 (myoblasts) differentiated Permissive Mus musculus GSE63716 ... MA0499.2
MYOD1 C2C12 (myoblasts) Day: 2 of differentiation Celltype: myoblast Permissive Mus musculus GSE69527 ... MA0499.2
MYOD1 embryonic stem cells Treatment: doxycycline Source: SA-tTA-MyoD Embryonic Stem Cells Strain: MC1 mouse ES cells derived from 129S6/SvEvTac Permissive Mus musculus GSE97712 ... MA0499.2
MYOD1 embryonic stem cells Treatment: no doxycycline no Source: SA-tTA-MyoD Embryonic Stem Cells Strain: MC1 mouse ES cells derived from 129S6/SvEvTac Permissive Mus musculus GSE97712 ... MA0499.2
MYOD1 Gastrocnemius muscle Sex: male Strain: C57bl6 Time: collection on 24 hour timecourse Permissive Mus musculus GSE122082 ... MA0499.2
MYOD1 primary myoblasts Conditions: Growth Media; Genotype: Twist2-CreERT2 tdTO (Twist2 overexpression); Treatment: infected with GFP; Permissive Mus musculus GSE127998 ... MA0499.2
MYOD1 primary myoblasts Conditions: differentiation medium; Genotype: Twist2-CreERT2 tdTO (Twist2 overexpression); Treatment: infected with GFP; Permissive Mus musculus GSE127998 ... MA0499.2
MYOD1 primary myoblasts Conditions: Growth Media; Genotype: Twist2-CreERT2 tdTO (Twist2 overexpression); Treatment: infected with 3xTy1-Twist2; Permissive Mus musculus GSE127998 ... MA0499.2
MYOD1 primary myoblasts Conditions: differentiation medium; Genotype: Twist2-CreERT2 tdTO (Twist2 overexpression); Treatment: infected with 3xTy1-Twist2; Permissive Mus musculus GSE127998 ... MA0499.2
MYOD1 myocytes Permissive Mus musculus ENCSR000AIH ... MA0499.2
MYOD1 myocytes Permissive Mus musculus ENCSR000AIR ... MA0499.2
MYOD1 myocytes Permissive Mus musculus ENCSR000AIT ... MA0499.2
MYOD1 C2C12 (myoblasts) Permissive Mus musculus ENCSR000AIG ... MA0499.2
MYOD1 myoblasts Permissive Mus musculus GSE24852 ... MA0499.2
MYOD1 fibroblasts Permissive Mus musculus GSE24852 ... MA0499.2
MYOD1 P19 (embryonic carcinoma) Permissive Mus musculus GSE34906 ... MA0499.2
MYOD1 embryonic fibroblasts Permissive Mus musculus GSE34906 ... MA0499.2
MYOD1 C2C12 (myoblasts) Permissive Mus musculus GSE44824 ... MA0499.2
MYOD1 C2C12 (myoblasts) Permissive Mus musculus GSE49313 ... MA0499.2
MYOD1 C2C12 (myoblasts) Permissive Mus musculus GSE49313 ... MA0499.2
MYOD1 brown preadipocytes Permissive Mus musculus GSE50465 ... MA0499.2
MYOD1 brown preadipocytes Permissive Mus musculus GSE50465 ... MA0499.2
MYOD1 brown preadipocytes Permissive Mus musculus GSE50465 ... MA0499.2
MYOD1 brown preadipocytes Permissive Mus musculus GSE50465 ... MA0499.2
MYOD1 myoblasts Permissive Mus musculus GSE56077 ... MA0499.2
MYOD1 embryonic fibroblasts Permissive Mus musculus GSE75370 ... MA0499.2
MYOD1 C2C12 (myoblasts) Permissive Mus musculus GSE63716 ... MA0499.2
MYOD1 RH4 (alveolar rhabdomyosarcoma) Permissive Homo sapiens GSE83726 ... MA0499.2
MYOD1 dermal fibroblasts Permissive Homo sapiens GSE93258 ... MA0499.2
MYOD1 myoblasts Permissive Homo sapiens GSE50413 MA0499.2
MYOD1 rhabdomyosarcoma Permissive Homo sapiens GSE50413 MA0499.2