Detailed information of SNPC-4

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Dataset summary

TF Name: SNPC-4 Species: Caenorhabditis elegans
Cell-type/Tissue: Whole worms (developmental stage: L3) Condition/Source: Genotype: unc-119(ed3) III; wgIs179 [unc-119(+) gei-11::TY1::EGFP::3xFLAG]; Sex: Hermaphrodite;
JASPAR ID: MA0544.1 Collections: Permissive Robust
References: GEO GSE35276 GSM864854 GTRD EXP047075

External links

Models for profile: MA0544.1

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Summary plots

Statistical details

Model Peak caller Model ID Enrichment Zone TFBSs Score threshold Centrality p-value (log10)
DAMO MACS MA0544.1 97.5 2118 88 -8.32818855439819

19 datasets found for the same TF (SNPC-4) in other cell-types/tissues

TF Name Cell-line Condition/Source Collections Species Identifiers JASPAR ID
SNPC-4 Whole worms (developmental stage: young adults) strain: OP179, genotype: unc-119(ed3) III; wgIs179., sex:mixed Permissive Caenorhabditis elegans ENCSR395BWO MA0544.1
SNPC-4 Whole worms (developmental stage: young adults) strain: OP179, genotype: unc-119(ed3) III; wgIs179., sex:mixed Permissive Caenorhabditis elegans ENCSR798QYD MA0544.1
SNPC-4 Whole worms (developmental stage: L1) strain: OP179, genotype: unc-119(ed3) III; wgIs179., sex:mixed Permissive Robust Caenorhabditis elegans ENCSR827AIS MA0544.1
SNPC-4 Whole worms (developmental stage: young adults) strain: YL487, sex:hermaphrodite Permissive Robust Caenorhabditis elegans ENCSR032FII MA0544.1
SNPC-4 Whole worms (mixed-stage embryos) strain: OP179, genotype: unc-119(ed3) III; wgIs179., sex:mixed Permissive Robust Caenorhabditis elegans ENCSR568VIQ MA0544.1
SNPC-4 Whole worms (developmental stage: young adults) strain: YL551, sex:hermaphrodite Permissive Caenorhabditis elegans ENCSR623HHL MA0544.1
SNPC-4 Whole worms (developmental stage: young adults) strain: YL457, genotype: unc-119(ed3)III;vrIs87[pPIE-1::GEI-11::GFP::GEI-11 3'UTR,unc-119(+), sex:mixed Permissive Caenorhabditis elegans ENCSR604JOF MA0544.1
SNPC-4 Whole worms (developmental stage: L4/young adults) strain: OP179, genotype: unc-119(ed3) III; wgIs179., sex:mixed Permissive Robust Caenorhabditis elegans ENCSR513NQL MA0544.1
SNPC-4 Whole worms (developmental stage: L3) strain: OP179, genotype: unc-119(ed3) III; wgIs179., sex:mixed Permissive Robust Caenorhabditis elegans ENCSR399PUK MA0544.1
SNPC-4 Whole worms (developmental stage: L2) strain: OP179, genotype: unc-119(ed3) III; wgIs179., sex:mixed Permissive Robust Caenorhabditis elegans ENCSR824CVJ MA0544.1
SNPC-4 Whole worms (developmental stage: L4/young adults) 5% Triton X-100; OP179 strain Permissive Robust Caenorhabditis elegans GSE53412 ... MA0544.1
SNPC-4 Whole worms (developmental stage: young adults) 5% Triton X-100; OP179 strain Permissive Caenorhabditis elegans GSE53412 ... MA0544.1
SNPC-4 Whole worms (developmental stage: L1) 1% Triton X-100; OP179 strain Permissive Caenorhabditis elegans GSE53412 ... MA0544.1
SNPC-4 Young adults, germline tissue 1% Triton X-100; YL457 strain Permissive Robust Caenorhabditis elegans GSE53412 ... MA0544.1
SNPC-4 Young adults, somatic cells Triton X-100; YL524 strain Permissive Robust Caenorhabditis elegans GSE53412 ... MA0544.1
SNPC-4 Whole worms (developmental stage: L3) Genotype: unc-119(ed3) III; wgIs179 [unc-119(+) gei-11::TY1::EGFP::3xFLAG]; Sex: Hermaphrodite; Permissive Robust Caenorhabditis elegans GSE35276 ... MA0544.1
SNPC-4 Whole worms (developmental stage: L2) Genotype: unc-119(ed3) III; wgIs179 [unc-119(+) gei-11::TY1::EGFP::3xFLAG]; Sex: Hermaphrodite; Permissive Robust Caenorhabditis elegans GSE37809 ... MA0544.1
SNPC-4 Whole worms (developmental stage: L2) Genotype: unc-119(ed3) III; wgIs179 [unc-119(+) gei-11::TY1::EGFP::3xFLAG]; Sex: Hermaphrodite; Permissive Robust Caenorhabditis elegans GSE37809 ... MA0544.1
SNPC-4 Whole worms (developmental stage: young adults) Permissive Caenorhabditis elegans GSE112682 ... MA0544.1