Dataset summary
TF Name: | LIN-54 | Species: | Caenorhabditis elegans |
Cell-type/Tissue: | Whole worms (developmental stage: late embryo) | Condition/Source: | genotype: wild type |
JASPAR ID: | MA1450.1 | Collections: | Permissive Robust |
References: | GEO GSE95071 GSM2495723 GTRD EXP044427 PUBMED 29091720 |
Statistical details
Model | Peak caller | Model ID | Enrichment Zone | TFBSs | Score threshold | Centrality p-value (log10) |
---|---|---|---|---|---|---|
DAMO | MACS | MA1450.1 | 58.5 | 907 | 91.1 | -6.41817053500076 |
8 datasets found for the same TF (LIN-54) in other cell-types/tissues
TF Name | Cell-line | Condition/Source | Collections | Species | Identifiers | JASPAR ID |
---|---|---|---|---|---|---|
LIN-54 | Whole worms (developmental stage: young adults) | strain: OP743, genotype: unc-119(tm4063); wgIs743 [lin-54::TY1::EGFP::3xFLAG(Fosmid: lin-54) + unc-119(+)], sex:mixed | Permissive | Caenorhabditis elegans | ENCSR117TRB | MA1450.1 |
LIN-54 | Whole worms (developmental stage: L3) | strain: N2 | Permissive Robust | Caenorhabditis elegans | GSE28760 ... | MA1450.1 |
LIN-54 | Whole worms (developmental stage: L3) | strain: N2 | Permissive Robust | Caenorhabditis elegans | GSE28760 ... | MA1450.1 |
LIN-54 | Whole worms (developmental stage: late embryo) | genotype: wild type | Permissive Robust | Caenorhabditis elegans | GSE95071 ... | MA1450.1 |
LIN-54 | Whole worms (developmental stage: late embryo) | genotype: wild type | Permissive Robust | Caenorhabditis elegans | GSE95071 ... | MA1450.1 |
LIN-54 | Whole worms (developmental stage: late embryo) | genotype: lin-35(n745) (LIN-35-null) | Permissive Robust | Caenorhabditis elegans | GSE95071 ... | MA1450.1 |
LIN-54 | Whole worms (developmental stage: late embryo) | genotype: lin-35(n745) (LIN-35-null) | Permissive | Caenorhabditis elegans | GSE95071 ... | MA1450.1 |
LIN-54 | Whole worms (developmental stage: late embryo) | genotype: lin-35(n745) (LIN-35-null) | Permissive Robust | Caenorhabditis elegans | GSE95071 ... | MA1450.1 |