Detailed information of USP

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Dataset summary

TF Name: USP Species: Drosophila melanogaster
Cell-type/Tissue: whole organism Condition/Source: strain: usp-GFP, genotype: w[1118]; PBac{y[+mDint2] w[+mC]=usp-GFP.FLAG}VK00033
JASPAR ID: MA0016.1 MA0534.1 Collections: Permissive
References: ENCODE ENCSR711BGO GEO GSM853479 GTRD EXP043691

External links

Models for profile: MA0016.1

Download TFBSs (dm6)

Download TFBSs in BED and FASTA format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser

Summary plots

Models for profile: MA0534.1

Download TFBSs (dm6)

Download TFBSs in BED and FASTA format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser

Summary plots

Statistical details

Model Peak caller Model ID Enrichment Zone TFBSs Score threshold Centrality p-value (log10)
DAMO MACS MA0016.1 1.5 7 87.7 0.0
DAMO MACS MA0534.1 12 84 88.7 0.0

2 datasets found for the same TF (USP) in other cell-types/tissues

TF Name Cell-line Condition/Source Collections Species Identifiers JASPAR ID
USP whole organism (development stage: wandering third instar larva) strain: usp-GFP, genotype: w[1118]; PBac{y[+mDint2] w[+mC]=usp-GFP.FLAG}VK00033 Permissive Drosophila melanogaster ENCSR998ZQZ MA0016.1 ...
USP whole organism (development stage: embryonic) strain: usp-GFP, genotype: w[1118]; PBac{y[+mDint2] w[+mC]=usp-GFP.FLAG}VK00033 Permissive Robust Drosophila melanogaster ENCSR303MJE MA0016.1 ...