Detailed information of REF6

Dataset summary

TF Name: REF6 Species: Arabidopsis thaliana
Cell-type/Tissue: 14 day old seedling Condition/Source: brm-1; Plants were grown in 1/2MS media with 22 degree in 16h light/8h dark
JASPAR ID: MA1415.1 Collections: Permissive Robust
References: GEO GSE72735 GSM1869296 GSM1869300 GTRD EXP041544 PUBMED 27111034

External links

Statistical details

Model Peak caller Model ID Enrichment Zone TFBSs Score threshold Centrality p-value (log10)
DAMO MACS MA1415.1 104 2613 91.1 -44.6631864226982

10 datasets found for the same TF (REF6) in other cell-types/tissues

TF Name Cell-line Condition/Source Collections Species Identifiers JASPAR ID
REF6 12 day old seedlings REF6p::REF6-HA ref6-1 Permissive Robust Arabidopsis thaliana GSE65329 ... MA1415.1
REF6 14 day old seedling Plants were grown in 1/2MS media with 22 degree in 16h light/8h dark Permissive Robust Arabidopsis thaliana GSE72735 ... MA1415.1
REF6 14 day old seedling Plants were grown in 1/2MS media with 22 degree in 16h light/8h dark Permissive Robust Arabidopsis thaliana GSE72735 ... MA1415.1
REF6 flowers, 5-week-old plants no DSG Permissive Robust Arabidopsis thaliana GSE106942 ... MA1415.1
REF6 flowers, 5-week-old plants DSG Permissive Robust Arabidopsis thaliana GSE106942 ... MA1415.1
REF6 flowers, 5-week-old plants DSG; triple mutant Permissive Arabidopsis thaliana GSE106942 ... MA1415.1
REF6 10 day old seedlings Ecotype: Columbia; Genotype: Col; Permissive Arabidopsis thaliana GSE111830 ... MA1415.1
REF6 10 day old seedlings Ecotype: Columbia; Genotype: drm1-2, drm2-2, cmt2-7, cmt3-11 quadruple mutant; Permissive Arabidopsis thaliana GSE111830 ... MA1415.1
REF6 10 day old seedlings Ecotype: Columbia; Genotype: met1-1; Permissive Arabidopsis thaliana GSE111830 ... MA1415.1
REF6 10 day old seedlings Ecotype: Columbia; Genotype: ref6-5; Permissive Arabidopsis thaliana GSE111830 ... MA1415.1