Detailed information of AG

  1. Home
  2. TF > AG

Dataset summary

TF Name: AG Species: Arabidopsis thaliana
Cell-type/Tissue: inflorescence Condition/Source: AG-GFP AP1-GR ap1 cal; 4 days after Dexamethasone treatment (early-intermediate floral stage ~ stage 4-5 flowers)
JASPAR ID: MA0005.2 Collections: Permissive Robust
References: GEO GSE45938 GSM1120014 GSM1120015 GTRD EXP041276 PUBMED 23821642

External links

Models for profile: MA0005.2

Download TFBSs (TAIR10)

Download TFBSs in BED and FASTA format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser

Summary plots

Statistical details

Model Peak caller Model ID Enrichment Zone TFBSs Score threshold Centrality p-value (log10)
DAMO MACS MA0005.2 52.5 2122 81.5 -3.34787483126442

1 datasets found for the same TF (AG) in other cell-types/tissues

TF Name Cell-line Condition/Source Collections Species Identifiers JASPAR ID
AG inflorescence AP1-GR ap1 cal; 4 days after Dexamethasone treatment (early-intermediate floral stage ~ stage 4-5 flowers) Permissive Arabidopsis thaliana GSE45938 ... MA0005.2