Detailed information of STAT1

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Dataset summary

TF Name: STAT1 Species: Mus musculus
Cell-type/Tissue: bone marrow-derived macrophages Condition/Source: IFNg (100 ng/ml) for 4hrs
JASPAR ID: MA0137.3 MA0517.1 Collections: Permissive Robust
References: GEO GSE84518 GSM2425227 GTRD EXP037817 PUBMED 28288101

External links

Models for profile: MA0137.3

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Visualize TFBSs in UCSC

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Summary plots

Models for profile: MA0517.1

Download TFBSs (mm10)

Download TFBSs in BED and FASTA format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser

Summary plots

Statistical details

Model Peak caller Model ID Enrichment Zone TFBSs Score threshold Centrality p-value (log10)
DAMO MACS MA0137.3 87 3734 86.4 -9.64424544343854
DAMO MACS MA0517.1 84 5092 80.8 -10.6366624455078

92 datasets found for the same TF (STAT1) in other cell-types/tissues

TF Name Cell-line Condition/Source Collections Species Identifiers JASPAR ID
STAT1 K562 (myelogenous leukemia) Interferon gamma treatment - 6 hours (Snyder) Permissive Robust Homo sapiens ENCSR000EHJ MA0137.3
STAT1 K562 (myelogenous leukemia) Interferon gamma treatment - 30 minutes (Snyder) Permissive Robust Homo sapiens ENCSR000EHK MA0137.3
STAT1 K562 (myelogenous leukemia) Interferon alpha treatment - 6 hours (Snyder) Permissive Robust Homo sapiens ENCSR000FAU MA0137.3
STAT1 K562 (myelogenous leukemia) 30 m of Interferon alpha (Snyder) Permissive Robust Homo sapiens ENCSR000FAV MA0137.3
STAT1 T-cells IFNg Permissive Homo sapiens GSE27158 ... MA0137.3
STAT1 BMDM (bone marrow-derived macrophages) IFNγ for 6 hour Permissive Robust Mus musculus GSE33913 ... MA0137.3 ...
STAT1 BMDM (bone marrow-derived macrophages) IFNβ for 6 hour Permissive Robust Mus musculus GSE33913 ... MA0137.3 ...
STAT1 BMDM (bone marrow-derived macrophages) IFNγ for 6 hour Permissive Robust Mus musculus GSE33913 ... MA0137.3 ...
STAT1 BMDM (bone marrow-derived macrophages) IFNβ for 6 hour Permissive Robust Mus musculus GSE33913 ... MA0137.3 ...
STAT1 HeLa S3 (cervical adenocarcinoma) IFN gamma Permissive Robust Homo sapiens GSE12782 ... MA0137.3 ...
STAT1 HeLa S3 (cervical adenocarcinoma) IFNgamma Permissive Robust Homo sapiens GSE15353 ... MA0137.3 ...
STAT1 dendritic cells LPS, 0 min Permissive Mus musculus GSE36099 ... MA0137.3 ...
STAT1 dendritic cells LPS, 120 min Permissive Mus musculus GSE36099 ... MA0137.3 ...
STAT1 BMDM (bone marrow-derived macrophages) IFNg (100 ng/ml) for 30min Permissive Robust Mus musculus GSE38377 ... MA0137.3 ...
STAT1 BMDM (bone marrow-derived macrophages) IFNg (100 ng/ml) for 1hrs Permissive Robust Mus musculus GSE38377 ... MA0137.3 ...
STAT1 BMDM (bone marrow-derived macrophages) IFNg (100 ng/ml) for 2hrs Permissive Robust Mus musculus GSE38377 ... MA0137.3 ...
STAT1 BMDM (bone marrow-derived macrophages) IFNg (100 ng/ml) for 4hrs Permissive Robust Mus musculus GSE38377 ... MA0137.3 ...
STAT1 BMDM (bone marrow-derived macrophages) IFNbeta for 30 minutes Permissive Robust Mus musculus GSE56121 ... MA0137.3 ...
STAT1 BMDM (bone marrow-derived macrophages) IFNbeta for 60 minutes Permissive Robust Mus musculus GSE56121 ... MA0137.3 ...
STAT1 BMDM (bone marrow-derived macrophages) IFNbeta for 30 minutes Permissive Robust Mus musculus GSE56121 ... MA0137.3 ...
STAT1 BMDM (bone marrow-derived macrophages) IFNbeta for 60 minutes Permissive Robust Mus musculus GSE56121 ... MA0137.3 ...
STAT1 BMDM (bone marrow-derived macrophages) LPS 10ng/ml for 2 hours Permissive Robust Mus musculus GSE56121 ... MA0137.3 ...
STAT1 BMDM (bone marrow-derived macrophages) IFNbeta 100U/ml for 1 hour Permissive Robust Mus musculus GSE56121 ... MA0137.3 ...
STAT1 BMDM (bone marrow-derived macrophages) IFNbeta 100U/ml for 2 hour Permissive Robust Mus musculus GSE56121 ... MA0137.3 ...
STAT1 BMDM (bone marrow-derived macrophages) IFNbeta 100U/ml for 4 hour Permissive Robust Mus musculus GSE56121 ... MA0137.3 ...
STAT1 BMDM (bone marrow-derived macrophages) IFNbeta 100U/ml for 1 hour Permissive Robust Mus musculus GSE56121 ... MA0137.3 ...
STAT1 BMDM (bone marrow-derived macrophages) IFNbeta 100U/ml for 2 hour Permissive Robust Mus musculus GSE56121 ... MA0137.3 ...
STAT1 BMDM (bone marrow-derived macrophages) IFNbeta 100U/ml for 4 hour Permissive Robust Mus musculus GSE56121 ... MA0137.3 ...
STAT1 BMDM (bone marrow-derived macrophages) IFNgamma 100U/ml for 1 hour Permissive Robust Mus musculus GSE56121 ... MA0137.3 ...
STAT1 BMDM (bone marrow-derived macrophages) IFNgamma 100U/ml for 2 hour Permissive Robust Mus musculus GSE56121 ... MA0137.3 ...
STAT1 BMDM (bone marrow-derived macrophages) IFNgamma 100U/ml for 4 hour Permissive Mus musculus GSE56121 ... MA0137.3 ...
STAT1 BMDM (bone marrow-derived macrophages) IFNgamma 100U/ml for 1 hour Permissive Robust Mus musculus GSE56121 ... MA0137.3 ...
STAT1 BMDM (bone marrow-derived macrophages) IFNgamma 100U/ml for 2 hour Permissive Robust Mus musculus GSE56121 ... MA0137.3 ...
STAT1 BMDM (bone marrow-derived macrophages) IFNgamma 100U/ml for 4 hour Permissive Robust Mus musculus GSE56121 ... MA0137.3 ...
STAT1 CD4+ T-cells IL21 Permissive Mus musculus GSE63204 ... MA0137.3 ...
STAT1 CD4+ T-cells Stat3 KO Permissive Mus musculus GSE63204 ... MA0137.3 ...
STAT1 CD4+ T-cells Stat3 KO, IL21 Permissive Mus musculus GSE63204 ... MA0137.3 ...
STAT1 CD4+ T-cells 3 day in vitro culture for Th0 Permissive Mus musculus GSE65621 ... MA0137.3
STAT1 CD4+ T-cells 3 day in vitro culture for Th0, treatment (IL6) Permissive Mus musculus GSE65621 ... MA0137.3 ...
STAT1 CD4+ T-cells 3 day in vitro culture for Th0, treatment (IL27) Permissive Mus musculus GSE65621 ... MA0137.3 ...
STAT1 CD4+ T-cells 3 day in vitro culture for Th0, STAT3 KO Permissive Mus musculus GSE65621 ... MA0137.3 ...
STAT1 CD4+ T-cells 3 day in vitro culture for Th0, treatment (IL6), STAT3 KO Permissive Mus musculus GSE65621 ... MA0137.3 ...
STAT1 CD4+ T-cells 3 day in vitro culture for Th0, treatment (IL27), STAT3 KO Permissive Mus musculus GSE65621 ... MA0137.3 ...
STAT1 B-cells 10,000U IFNa Permissive Mus musculus GSE75250 ... MA0137.3 ...
STAT1 bone marrow-derived macrophages IFNg 2h Permissive Robust Mus musculus GSE84518 ... MA0137.3 ...
STAT1 bone marrow-derived macrophages IFNg IL4 2h Permissive Robust Mus musculus GSE84518 ... MA0137.3 ...
STAT1 bone marrow-derived macrophages IFNg (100 ng/ml) for 2hrs Permissive Robust Mus musculus GSE84518 ... MA0137.3 ...
STAT1 AT-3 (mammary tumor) DMSO vehicle Permissive Mus musculus GSE94130 ... MA0137.3 ...
STAT1 AT-3 (mammary tumor) 1000nM JQ1 Permissive Mus musculus GSE94130 ... MA0137.3 ...
STAT1 AT-3 (mammary tumor) 1ng/mL IFN-γ Permissive Mus musculus GSE94130 ... MA0137.3 ...
STAT1 AT-3 (mammary tumor) 1000nM JQ1+ 1ng/mL IFN-γ Permissive Mus musculus GSE94130 ... MA0137.3 ...
STAT1 CD4+ T-cells ChIP-seq in vitro culture protocol (IFN-β) Permissive Mus musculus GSE96724 ... MA0137.3 ...
STAT1 CD4+ T-cells ChIP-seq in vitro culture protocol (IFN-γ) Permissive Mus musculus GSE96724 ... MA0137.3 ...
STAT1 CD4+ T-cells ChIP-seq in vitro culture protocol (nc) Permissive Mus musculus GSE96724 ... MA0137.3
STAT1 CD4+ T-cells ChIP-seq in vitro culture protocol (IFN-β) Permissive Mus musculus GSE96724 ... MA0137.3 ...
STAT1 CD4+ T-cells ChIP-seq in vitro culture protocol (IFN-γ) Permissive Mus musculus GSE96724 ... MA0137.3 ...
STAT1 CD4+ T-cells ChIP-seq in vitro culture protocol (nc) Permissive Mus musculus GSE96724 ... MA0137.3 ...
STAT1 HPC7 (haematopoietic multipotent progenitors) serum-starved Permissive Mus musculus GSE100835 ... MA0137.3 ...
STAT1 HPC7 (haematopoietic multipotent progenitors) thrombopoietin 30 minutes Permissive Robust Mus musculus GSE100835 ... MA0137.3 ...
STAT1 primary splenic NK cells IFNa Permissive Mus musculus GSE106137 ... MA0137.3 ...
STAT1 primary splenic NK cells IFNa, IL2 Permissive Robust Mus musculus GSE106137 ... MA0137.3 ...
STAT1 SET2 (Adult acute megakaryoblastic leukemia, Homo Sapiens) Treatment: DMSO 0.1%; Cell type: essential thrombocythemia; Permissive Homo sapiens GSE100566 ... MA0137.3 ...
STAT1 SET2 (Adult acute megakaryoblastic leukemia, Homo Sapiens) Treatment: DMSO 0.1%; Cell type: essential thrombocythemia; Permissive Homo sapiens GSE100566 ... MA0137.3 ...
STAT1 SET2 (Adult acute megakaryoblastic leukemia, Homo Sapiens) Treatment: CA 25 nM; Cell type: essential thrombocythemia; Permissive Homo sapiens GSE100566 ... MA0137.3 ...
STAT1 SET2 (Adult acute megakaryoblastic leukemia, Homo Sapiens) Treatment: CA 25 nM; Cell type: essential thrombocythemia; Permissive Homo sapiens GSE100566 ... MA0137.3 ...
STAT1 SET2 (Adult acute megakaryoblastic leukemia, Homo Sapiens) Treatment: untreated; Cell type: essential thrombocythemia; Permissive Homo sapiens GSE100566 ... MA0137.3 ...
STAT1 SET2 (Adult acute megakaryoblastic leukemia, Homo Sapiens) Treatment: untreated; Cell type: essential thrombocythemia; Permissive Homo sapiens GSE100566 ... MA0137.3 ...
STAT1 GM12878 (female B-cells lymphoblastoid cell line) Permissive Homo sapiens ENCSR332EYT MA0137.3
STAT1 GM23338 Permissive Homo sapiens ENCSR071NFQ MA0137.3 ...
STAT1 T-cells Permissive Homo sapiens GSE27158 ... MA0137.3
STAT1 BMDM (bone marrow-derived macrophages) Permissive Robust Mus musculus GSE33913 ... MA0137.3 ...
STAT1 BMDM (bone marrow-derived macrophages) Permissive Robust Mus musculus GSE33913 ... MA0137.3 ...
STAT1 HeLa S3 (cervical adenocarcinoma) Permissive Homo sapiens GSE15353 ... MA0137.3
STAT1 CD4+ T-cells Permissive Mus musculus GSE40463 ... MA0137.3 ...
STAT1 BMDM (bone marrow-derived macrophages) Permissive Mus musculus GSE38377 ... MA0137.3 ...
STAT1 BMDM (bone marrow-derived macrophages) Permissive Mus musculus GSE38377 ... MA0137.3 ...
STAT1 CD4+ T-cells Permissive Mus musculus GSE51531 ... MA0517.1
STAT1 3T3-L1 (embryonic fibroblasts) Permissive Mus musculus GSE56872 ... MA0137.3 ...
STAT1 BMDM (bone marrow-derived macrophages) Permissive Robust Mus musculus GSE56121 ... MA0137.3 ...
STAT1 BMDM (bone marrow-derived macrophages) Permissive Robust Mus musculus GSE56121 ... MA0137.3 ...
STAT1 BMDM (bone marrow-derived macrophages) Permissive Mus musculus GSE56121 ... MA0137.3 ...
STAT1 BMDM (bone marrow-derived macrophages) Permissive Mus musculus GSE56121 ... MA0137.3 ...
STAT1 BMDM (bone marrow-derived macrophages) Permissive Mus musculus GSE56121 ... MA0137.3 ...
STAT1 BMDM (bone marrow-derived macrophages) Permissive Mus musculus GSE56121 ... MA0137.3 ...
STAT1 CD4+ T-cells Permissive Mus musculus GSE63204 ... MA0137.3 ...
STAT1 B-cells Permissive Mus musculus GSE75250 ... MA0137.3 ...
STAT1 MCF7 (Invasive ductal breast carcinoma) Permissive Homo sapiens GSE81859 ... MA0137.3 ...
STAT1 bone marrow-derived macrophages Permissive Robust Mus musculus GSE84518 ... MA0137.3 ...
STAT1 NCI-H358 (human nnon small cell lung cancer cell line) Permissive Homo sapiens GSE79707 ... MA0517.1
STAT1 AGS (gastric adenocarcinoma) Permissive Robust Homo sapiens GSE79707 ... MA0137.3 ...
STAT1 INFG_LPS Permissive Homo sapiens GSE43036 MA0137.3
STAT1 LPS Permissive Homo sapiens GSE43036 MA0137.3