Detailed information of REST

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Dataset summary

TF Name: REST Species: Rattus norvegicus
Cell-type/Tissue: hippocampal neural stem cells Condition/Source: quiescence
JASPAR ID: MA0138.2 Collections: Permissive Robust
References: GEO GSE70695 GSM1816597 GTRD EXP037002 PUBMED 27819263

External links

Models for profile: MA0138.2

Download TFBSs (Rnor_6.0)

Download TFBSs in BED and FASTA format

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Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser

Summary plots

Statistical details

Model Peak caller Model ID Enrichment Zone TFBSs Score threshold Centrality p-value (log10)
DAMO MACS MA0138.2 68 1669 84 -74.8273879065804

82 datasets found for the same TF (REST) in other cell-types/tissues

TF Name Cell-line Condition/Source Collections Species Identifiers JASPAR ID
REST A549 (lung carcinoma) 1 h with 0.02% Ethanol (Myers) Permissive Homo sapiens ENCSR000BQP MA0138.2
REST U87 (glioblastoma) None Permissive Robust Homo sapiens wgEncodeEH001554 MA0138.2
REST U87 (glioblastoma) None Permissive Robust Homo sapiens wgEncodeEH001554 MA0138.2
REST hippocampal neural stem cells quiescence Permissive Robust Rattus norvegicus GSE70695 ... MA0138.2
REST hippocampal neural stem cells proliferation Permissive Robust Rattus norvegicus GSE70695 ... MA0138.2
REST hippocampal neural stem cells proliferation Permissive Robust Rattus norvegicus GSE70695 ... MA0138.2
REST paraventricular nucleus CNQX/MK-801 (50 uM) for 52 h Permissive Robust Rattus norvegicus GSE87709 ... MA0138.2
REST lin-bone marrow Strain: C57BL6/J Genotype: wildtype DN3 Treatment: cultured on OP9DL1 Permissive Robust Mus musculus GSE110305 ... MA0138.2
REST lin-bone marrow Strain: C57BL6/J Genotype: wildtype DN3 Treatment: cultured on OP9DL1 Permissive Robust Mus musculus GSE110305 ... MA0138.2
REST lin-bone marrow Strain: C57BL6/J Genotype: Bcl11b knockout DN3 Treatment: cultured on OP9DL1 Permissive Robust Mus musculus GSE110305 ... MA0138.2
REST lin-bone marrow Strain: C57BL6/J Genotype: Bcl11b knockout DN3 Treatment: cultured on OP9DL1 Permissive Robust Mus musculus GSE110305 ... MA0138.2
REST Scid.adh.2c2 cells Genotype: tranduced with shControl-GFP Permissive Robust Mus musculus GSE110305 ... MA0138.2
REST Scid.adh.2c2 cells Genotype: tranduced with shBcl11b-GFP Permissive Robust Mus musculus GSE110305 ... MA0138.2
REST K562 (myelogenous leukemia) Treatment: None; Permissive Robust Homo sapiens GSE29611 ... MA0138.2
REST CRC107 (colorectal cancer metastatic stem cells) Treatment: shRNA; Genotype: CDH1 knockdown; Permissive Homo sapiens GSE112555 ... MA0138.2
REST CRC107 (colorectal cancer metastatic stem cells) Source: organoid dissociation; Permissive Robust Homo sapiens GSE112555 ... MA0138.2
REST CRC107 (colorectal cancer metastatic stem cells) Source: organoid integrity; Permissive Robust Homo sapiens GSE112555 ... MA0138.2
REST CRC121 (colorectal cancer metastatic stem cells) Source: organoid dissociation; Permissive Robust Homo sapiens GSE112555 ... MA0138.2
REST CRC121 (colorectal cancer metastatic stem cells) Source: organoid integrity; Permissive Robust Homo sapiens GSE112555 ... MA0138.2
REST embryonic stem cells Strain: 129S6/SvEvTac; Genotype: wildtype; Permissive Robust Mus musculus GSE112132 ... MA0138.2
REST embryonic stem cells Strain: 129S6/SvEvTac; Genotype: wildtype; Permissive Robust Mus musculus GSE112132 ... MA0138.2
REST embryonic stem cells Strain: 129S6/SvEvTac; Genotype: Brg1 knockout; Permissive Robust Mus musculus GSE112132 ... MA0138.2
REST embryonic stem cells Strain: 129S6/SvEvTac; Genotype: Brg1 knockout; Permissive Robust Mus musculus GSE112132 ... MA0138.2
REST embryonic stem cells Strain: 129S6/SvEvTac; Genotype: wildtype; Permissive Robust Mus musculus GSE112132 ... MA0138.2
REST embryonic stem cells Strain: 129S6/SvEvTac; Genotype: Snf2h knockout; Permissive Robust Mus musculus GSE112132 ... MA0138.2
REST embryonic stem cells Strain: 129S6/SvEvTac; Genotype: Snf2h knockout, Snf2h wiltype add-back; Permissive Robust Mus musculus GSE112132 ... MA0138.2
REST embryonic stem cells Strain: 129S6/SvEvTac; Genotype: Snf2h ko, Snf2h mutant add-back; Permissive Robust Mus musculus GSE112132 ... MA0138.2
REST K562 (myelogenous leukemia) Permissive Robust Homo sapiens ENCSR000ATM MA0138.2
REST GM12878 (female B-cells lymphoblastoid cell line) Permissive Robust Homo sapiens ENCSR000BGF MA0138.2
REST WA01 (H1, human embryonic stem cells) Permissive Robust Homo sapiens ENCSR000BHM MA0138.2
REST SK-N-SH (neuroblastoma) Permissive Robust Homo sapiens ENCSR000BJJ MA0138.2
REST HepG2 (hepatoblastoma) Permissive Robust Homo sapiens ENCSR000BJL MA0138.2
REST PANC1 (pancreatic ductal adenocarcinoma) Permissive Robust Homo sapiens ENCSR000BJO MA0138.2
REST PFSK1 (primitive neuroectodermal tumor) Permissive Robust Homo sapiens ENCSR000BJP MA0138.2
REST HeLa S3 (cervical adenocarcinoma) Permissive Robust Homo sapiens ENCSR000BMN MA0138.2
REST K562 (myelogenous leukemia) Permissive Robust Homo sapiens ENCSR000BMW MA0138.2
REST HepG2 (hepatoblastoma) Permissive Robust Homo sapiens ENCSR000BOT MA0138.2
REST PFSK1 (primitive neuroectodermal tumor) Permissive Robust Homo sapiens ENCSR000BOX MA0138.2
REST PANC1 (pancreatic ductal adenocarcinoma) Permissive Robust Homo sapiens ENCSR000BPK MA0138.2
REST GM12878 (female B-cells lymphoblastoid cell line) Permissive Robust Homo sapiens ENCSR000BQS MA0138.2
REST MCF7 (Invasive ductal breast carcinoma) Permissive Robust Homo sapiens ENCSR000BSP MA0138.2
REST HL-60 (acute myeloid leukemia) Permissive Robust Homo sapiens ENCSR000BTF MA0138.2
REST neural cell Permissive Homo sapiens ENCSR000BTV MA0138.2
REST PANC1 (pancreatic ductal adenocarcinoma) Permissive Robust Homo sapiens ENCSR000BUP MA0138.2
REST Ishikawa (endometrial adenocarcinoma) Permissive Robust Homo sapiens ENCSR000BUU MA0138.2
REST HCT-116 (colon carcinoma) Permissive Robust Homo sapiens ENCSR000BVI MA0138.2
REST liver Permissive Robust Homo sapiens ENCSR893QWP MA0138.2
REST liver Permissive Robust Homo sapiens ENCSR867WPH MA0138.2
REST WA01 (H1, human embryonic stem cells) Permissive Robust Homo sapiens ENCSR663WAR MA0138.2
REST A549 (lung carcinoma) Permissive Robust Homo sapiens ENCSR892DRK MA0138.2
REST GM23338 Permissive Robust Homo sapiens ENCSR871KYB MA0138.2
REST V6.5 (embryonic stem cells) Permissive Robust Mus musculus GSE26680 ... MA0138.2
REST V6.5 (embryonic stem cells) Permissive Robust Mus musculus GSE27841 ... MA0138.2
REST myocytes Permissive Mus musculus ENCSR000AIS ... MA0138.2
REST embryonic stem cells Permissive Robust Mus musculus GSE27148 ... MA0138.2
REST embryonic stem cells Permissive Robust Mus musculus GSE27148 ... MA0138.2
REST embryonic stem cells Permissive Robust Mus musculus GSE27148 ... MA0138.2
REST neural progenitors Permissive Robust Mus musculus GSE27148 ... MA0138.2
REST neural progenitors Permissive Robust Mus musculus GSE27148 ... MA0138.2
REST neural progenitors Permissive Robust Mus musculus GSE27148 ... MA0138.2
REST K562 (myelogenous leukemia) Permissive Robust Homo sapiens GSE32509 ... MA0138.2
REST acute promyelocytic leukemia blasts Permissive Robust Homo sapiens GSE42044 ... MA0138.2
REST embryonic stem cells Permissive Robust Mus musculus GSE48122 ... MA0138.2
REST embryonic stem cells Permissive Mus musculus GSE48122 ... MA0138.2
REST embryonic stem cells Permissive Robust Mus musculus GSE48320 ... MA0138.2
REST WA01 (H1, human embryonic stem cells) Permissive Robust Homo sapiens GSE101251 ... MA0138.2
REST WA01 (H1, human embryonic stem cells) Permissive Robust Homo sapiens GSE101251 ... MA0138.2
REST A549 (lung carcinoma) Permissive Robust Homo sapiens GSE101362 ... MA0138.2
REST A549 (lung carcinoma) Permissive Robust Homo sapiens GSE101362 ... MA0138.2
REST paraventricular nucleus Permissive Robust Rattus norvegicus GSE87709 ... MA0138.2
REST HEK293 (embryonic kidney) Permissive Robust Homo sapiens ENCSR896UBV MA0138.2
REST GM12878 (female B-cells lymphoblastoid cell line) Permissive Robust Homo sapiens GSE53366 ... MA0138.2
REST GM12878 (female B-cells lymphoblastoid cell line) Permissive Robust Homo sapiens GSE53366 ... MA0138.2
REST Jurkat (T-cells) Permissive Robust Homo sapiens GSE53366 ... MA0138.2
REST GM12878 (female B-cells lymphoblastoid cell line) Permissive Homo sapiens GSE53366 ... MA0138.2
REST hepatocytes Permissive Robust Homo sapiens ERP000395 MA0138.2
REST Permissive Robust Homo sapiens GSE49570 MA0138.2
REST K562 (myelogenous leukemia) Permissive Robust Homo sapiens GSE70482 MA0138.2
REST H295R (adrenal cortex carcinoma) SF1 Permissive Robust Homo sapiens GSE49014 MA0138.2
REST GP5d (colon adenocarcinoma) SIRAD21 Permissive Robust Homo sapiens GSE51234 MA0138.2
REST H295R (adrenal cortex carcinoma) Permissive Robust Homo sapiens GSE49014 MA0138.2
REST GP5d (colon adenocarcinoma) Permissive Robust Homo sapiens GSE51234 MA0138.2