Detailed information of PAX3

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Dataset summary

TF Name: PAX3 Species: Mus musculus
Cell-type/Tissue: myoblasts Condition/Source:
JASPAR ID: MA0780.1 MA1546.1 Collections: Permissive Robust
References: GEO GSE25064 GSM615620 GTRD EXP030938 PUBMED 22609161

External links

Models for profile: MA0780.1

Download TFBSs (mm10)

Download TFBSs in BED and FASTA format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser

Summary plots

Models for profile: MA1546.1

Download TFBSs (mm10)

Download TFBSs in BED and FASTA format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser

Summary plots

Statistical details

Model Peak caller Model ID Enrichment Zone TFBSs Score threshold Centrality p-value (log10)
DAMO MACS MA0780.1 56.5 1559 90.6 -32.9375996843026
DAMO MACS MA1546.1 66.5 1761 82 -18.3703953350778

6 datasets found for the same TF (PAX3) in other cell-types/tissues

TF Name Cell-line Condition/Source Collections Species Identifiers JASPAR ID
PAX3 differentiated embryonic stem cells Treatment: doxycycline for 1-day; Permissive Robust Mus musculus GSE125203 ... MA0780.1 ...
PAX3 differentiated embryonic stem cells Treatment: doxycycline for 6-day; Conditions: day9 of differentiation; Permissive Robust Mus musculus GSE125203 ... MA0780.1 ...
PAX3 differentiated embryonic stem cells Treatment: doxycycline for 6-day; Conditions: day9 of differentiation; Permissive Robust Mus musculus GSE125203 ... MA0780.1 ...
PAX3 NIH 3T3 (embryonic fibroblasts) Treatment: not treated; Permissive Mus musculus GSE125203 ... MA0780.1 ...
PAX3 NIH 3T3 (embryonic fibroblasts) Treatment: doxycycline for 1-day; Permissive Robust Mus musculus GSE125203 ... MA0780.1 ...
PAX3 differentiated embryonic stem cells Treatment: doxycycline for 1-day; Permissive Robust Mus musculus GSE125203 ... MA0780.1 ...