Detailed information of HOXC9

  1. Home
  2. TF > HOXC9

Dataset summary

TF Name: HOXC9 Species: Mus musculus
Cell-type/Tissue: Ainv15 (embryonic stem cells) Condition/Source: +Dox
JASPAR ID: MA0485.2 Collections: Permissive Robust
References: GEO GSE30882 GSM766061 GTRD EXP001008 PUBMED 22081127

External links

Models for profile: MA0485.2

Download TFBSs (mm10)

Download TFBSs in BED and FASTA format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser

Summary plots

Statistical details

Model Peak caller Model ID Enrichment Zone TFBSs Score threshold Centrality p-value (log10)
DAMO MACS MA0485.2 105.5 21132 84.5 -19.7193003916122

2 datasets found for the same TF (HOXC9) in other cell-types/tissues

TF Name Cell-line Condition/Source Collections Species Identifiers JASPAR ID
HOXC9 Ainv15 (embryonic stem cells) +Dox Permissive Robust Mus musculus GSE30882 ... MA0485.2
HOXC9 Ainv15 (embryonic stem cells) Permissive Robust Mus musculus GSE21812 ... MA0485.2