Detailed information of RFX1

  1. Home
  2. TF > RFX1

Dataset summary

TF Name: RFX1 Species: Mus musculus
Cell-type/Tissue: neural progenitors Condition/Source:
JASPAR ID: MA0509.2 Collections: Permissive Robust
References: GEO GSE24164 GSM594584 GTRD EXP000893 PUBMED 21106759

External links

Models for profile: MA0509.2

Download TFBSs (mm10)

Download TFBSs in BED and FASTA format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser

Summary plots

Statistical details

Model Peak caller Model ID Enrichment Zone TFBSs Score threshold Centrality p-value (log10)
DAMO MACS MA0509.2 84.5 8594 83.6 -7.47468152064573

9 datasets found for the same TF (RFX1) in other cell-types/tissues

TF Name Cell-line Condition/Source Collections Species Identifiers JASPAR ID
RFX1 cortical neurons unstimulated Permissive Robust Mus musculus GSE77213 ... MA0509.2
RFX1 cortical neurons KCl Depolarized 1 hour Permissive Robust Mus musculus GSE77213 ... MA0509.2
RFX1 HepG2 (hepatoblastoma) Permissive Robust Homo sapiens ENCSR928API MA0509.2
RFX1 pancreatic beta-cells Permissive Mus musculus GSE72272 ... MA0509.2
RFX1 cortical neurons Permissive Mus musculus GSE77213 ... MA0509.2
RFX1 MCF7 (Invasive ductal breast carcinoma) Permissive Robust Homo sapiens ENCSR066TET MA0509.2
RFX1 MCF7 (Invasive ductal breast carcinoma) Permissive Robust Homo sapiens ENCSR788XNX MA0509.2
RFX1 K562 (myelogenous leukemia) Permissive Robust Homo sapiens ENCSR968GIB MA0509.2
RFX1 K562 (myelogenous leukemia) Permissive Robust Homo sapiens ENCSR041AXL MA0509.2