Detailed information of SMAD5

  1. Home
  2. TF > SMAD5

Dataset summary

TF Name: SMAD5 Species: Homo sapiens
Cell-type/Tissue: pulmonary arterial smooth muscle cells Condition/Source: 50 ng/ml BMP-4
JASPAR ID: MA1557.1 Collections: Permissive
References: GEO GSE28848 GSM714358 GTRD EXP000262 PUBMED 21764776

External links

Models for profile: MA1557.1

Download TFBSs (hg38)

Download TFBSs in BED and FASTA format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser

Summary plots

Statistical details

Model Peak caller Model ID Enrichment Zone TFBSs Score threshold Centrality p-value (log10)
DAMO MACS MA1557.1 67.5 6554 90.3 -0.870832676626683

2 datasets found for the same TF (SMAD5) in other cell-types/tissues

TF Name Cell-line Condition/Source Collections Species Identifiers JASPAR ID
SMAD5 K562 (myelogenous leukemia) Permissive Homo sapiens ENCSR000FCD MA1557.1
SMAD5 GM12878 (female B-cells lymphoblastoid cell line) Permissive Homo sapiens ENCSR251OVJ MA1557.1