Detailed information of PDX1

  1. Home
  2. TF > PDX1

Dataset summary

TF Name: PDX1 Species: Homo sapiens
Cell-type/Tissue: pancreatic islets Condition/Source:
JASPAR ID: MA0132.2 Collections: Permissive Robust
References: GEO ERP001456

External links

Models for profile: MA0132.2

Download TFBSs (hg38)

Download TFBSs in BED and FASTA format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser

Summary plots

Statistical details

Model Peak caller Model ID Enrichment Zone TFBSs Score threshold Centrality p-value (log10)
DAMO MACS MA0132.2 66.5 47872 86.1 -9.59846682546882

9 datasets found for the same TF (PDX1) in other cell-types/tissues

TF Name Cell-line Condition/Source Collections Species Identifiers JASPAR ID
PDX1 CyT49-derived endodermal cells none Permissive Robust Homo sapiens GSE54471 ... MA0132.2
PDX1 pancreatic acinar cells Strain: C57BL/6J Cell line: NB490 Permissive Robust Mus musculus GSE91053 ... MA0132.2
PDX1 pancreatic acinar cells Strain: C57BL/6J Cell line: NB490 Permissive Robust Mus musculus GSE91053 ... MA0132.2
PDX1 pancreatic ductal adenocarcinoma Cell line: NB490 Permissive Mus musculus GSE91054 ... MA0132.2
PDX1 Beta-TC-6 (insulinoma) Permissive Robust Mus musculus GSE70960 ... MA0132.2
PDX1 iPS (derived pancreatic precursor cells) Permissive Robust Homo sapiens GSE106949 ... MA0132.2
PDX1 pancreatic islets Permissive Homo sapiens ERP004003 MA0132.2
PDX1 H9 Permissive Robust Homo sapiens ERP004206 MA0132.2
PDX1 hESC-1 (Embryonic stem cells) Permissive Robust Homo sapiens GSE58685 MA0132.2