Specific Datasets List
This API provides an easy-to-use REST web interface to query/retrieve data
from the UniBind database. The API comes with a human browsable interface and
also a programmatic interface which return the results in different formats,
including
json, jsonp, yaml,
bed, and also api for a browsable interface.
GET /api/v1/specific/?collection=Robust&format=api&page=8&q=&species=3702&summary=true
{ "count": 78, "next": null, "previous": "https://unibind.uio.no/api/v1/specific/?collection=Robust&format=api&page=7&q=&species=3702&summary=true", "results": [ { "folder": { "folder": "EXP041544.14_day_old_seedling.REF6", "tf_name": "REF6", "samples": [ { "cell": { "title": "14 day old seedling" }, "biological_condition": "brm-1; Plants were grown in 1/2MS media with 22 degree in 16h light/8h dark" } ], "references": [ { "identifier": "GEO:GSM1869296" }, { "identifier": "PUBMED:27111034" }, { "identifier": "GEO:GSE72735" }, { "identifier": "GEO:GSM1869300" }, { "identifier": "GTRD:EXP041544" } ], "species": { "name": "Arabidopsis thaliana" } }, "jaspar_id": "MA1415.1", "bed_filename": "macs/DAMO/EXP041544.14_day_old_seedling.REF6/EXP041544.14_day_old_seedling.REF6.MA1415.1.damo.bed", "fasta_filename": "macs/DAMO/EXP041544.14_day_old_seedling.REF6/EXP041544.14_day_old_seedling.REF6.MA1415.1.damo.fa", "profile_name": "REF6", "synonyms": [ "AT3G48430", "JMJ12", "Jumonji domain-containing protein 12", "relative of early flowering 6" ] }, { "folder": { "folder": "EXP041545.14_day_old_seedling.REF6", "tf_name": "REF6", "samples": [ { "cell": { "title": "14 day old seedling" }, "biological_condition": "Plants were grown in 1/2MS media with 22 degree in 16h light/8h dark" } ], "references": [ { "identifier": "GEO:GSM1869295" }, { "identifier": "PUBMED:27111034" }, { "identifier": "GEO:GSM1869299" }, { "identifier": "GEO:GSE72735" }, { "identifier": "GTRD:EXP041545" } ], "species": { "name": "Arabidopsis thaliana" } }, "jaspar_id": "MA1415.1", "bed_filename": "macs/DAMO/EXP041545.14_day_old_seedling.REF6/EXP041545.14_day_old_seedling.REF6.MA1415.1.damo.bed", "fasta_filename": "macs/DAMO/EXP041545.14_day_old_seedling.REF6/EXP041545.14_day_old_seedling.REF6.MA1415.1.damo.fa", "profile_name": "REF6", "synonyms": [ "AT3G48430", "JMJ12", "Jumonji domain-containing protein 12", "relative of early flowering 6" ] }, { "folder": { "folder": "EXP046633.whole_plants.HY5", "tf_name": "HY5", "samples": [ { "cell": { "title": "whole plants" }, "biological_condition": "Treatment: blue light treated; Ecotype: Ws; Genotype: HY5 mutant;" } ], "references": [ { "identifier": "GEO:GSM3309416" }, { "identifier": "GEO:GSM3309417" }, { "identifier": "GEO:GSM3309415" }, { "identifier": "GEO:GSE117797" }, { "identifier": "GTRD:EXP046633" } ], "species": { "name": "Arabidopsis thaliana" } }, "jaspar_id": "MA0551.1", "bed_filename": "macs/DAMO/EXP046633.whole_plants.HY5/EXP046633.whole_plants.HY5.MA0551.1.damo.bed", "fasta_filename": "macs/DAMO/EXP046633.whole_plants.HY5/EXP046633.whole_plants.HY5.MA0551.1.damo.fa", "profile_name": "HY5", "synonyms": [ "AT5G11260", "BZIP TRANSCRIPTION FACTOR HY5", "Basic-leucine zipper (bZIP) transcription factor family protein", "ELONGATED HYPOCOTYL 5", "F2I11.150", "F2I11_150", "REVERSAL OF THE DET PHENOTYPE 5", "TED 5" ] }, { "folder": { "folder": "EXP046634.whole_plants.HY5", "tf_name": "HY5", "samples": [ { "cell": { "title": "whole plants" }, "biological_condition": "Treatment: red light treated; Ecotype: Ws; Genotype: HY5 mutant;" } ], "references": [ { "identifier": "GEO:GSM3309419" }, { "identifier": "GEO:GSM3309418" }, { "identifier": "GEO:GSM3309420" }, { "identifier": "GEO:GSE117797" }, { "identifier": "GTRD:EXP046634" } ], "species": { "name": "Arabidopsis thaliana" } }, "jaspar_id": "MA0551.1", "bed_filename": "macs/DAMO/EXP046634.whole_plants.HY5/EXP046634.whole_plants.HY5.MA0551.1.damo.bed", "fasta_filename": "macs/DAMO/EXP046634.whole_plants.HY5/EXP046634.whole_plants.HY5.MA0551.1.damo.fa", "profile_name": "HY5", "synonyms": [ "AT5G11260", "BZIP TRANSCRIPTION FACTOR HY5", "Basic-leucine zipper (bZIP) transcription factor family protein", "ELONGATED HYPOCOTYL 5", "F2I11.150", "F2I11_150", "REVERSAL OF THE DET PHENOTYPE 5", "TED 5" ] }, { "folder": { "folder": "EXP046646.whole_3_days_seedings.ARR14", "tf_name": "ARR14", "samples": [ { "cell": { "title": "whole 3 days seedings" }, "biological_condition": "Treatment: 10uM 6BA, 4 hours on LS plates (Lightlong day); Tagline:ypet; Accession: ARR14ypet;" } ], "references": [ { "identifier": "GEO:GSE94486" }, { "identifier": "GEO:GSM2476327" }, { "identifier": "PUBMED:29686312" }, { "identifier": "GTRD:EXP046646" } ], "species": { "name": "Arabidopsis thaliana" } }, "jaspar_id": "MA0947.1", "bed_filename": "macs/DAMO/EXP046646.whole_3_days_seedings.ARR14/EXP046646.whole_3_days_seedings.ARR14.MA0947.1.damo.bed", "fasta_filename": "macs/DAMO/EXP046646.whole_3_days_seedings.ARR14/EXP046646.whole_3_days_seedings.ARR14.MA0947.1.damo.fa", "profile_name": "ARR14", "synonyms": [ "ARR14", "AT2G01760", "T8O11.7", "T8O11_7", "response regulator 14" ] }, { "folder": { "folder": "EXP048500.flowers_5-week-old_plants.REF6", "tf_name": "REF6", "samples": [ { "cell": { "title": "flowers, 5-week-old plants" }, "biological_condition": "no DSG" } ], "references": [ { "identifier": "GEO:GSM2857897" }, { "identifier": "GEO:GSM2857895" }, { "identifier": "GEO:GSM2857896" }, { "identifier": "GEO:GSE106942" }, { "identifier": "PUBMED:30104650" }, { "identifier": "GTRD:EXP048500" } ], "species": { "name": "Arabidopsis thaliana" } }, "jaspar_id": "MA1415.1", "bed_filename": "macs/DAMO/EXP048500.flowers_5-week-old_plants.REF6/EXP048500.flowers_5-week-old_plants.REF6.MA1415.1.damo.bed", "fasta_filename": "macs/DAMO/EXP048500.flowers_5-week-old_plants.REF6/EXP048500.flowers_5-week-old_plants.REF6.MA1415.1.damo.fa", "profile_name": "REF6", "synonyms": [ "AT3G48430", "JMJ12", "Jumonji domain-containing protein 12", "relative of early flowering 6" ] }, { "folder": { "folder": "EXP048501.flowers_5-week-old_plants.REF6", "tf_name": "REF6", "samples": [ { "cell": { "title": "flowers, 5-week-old plants" }, "biological_condition": "DSG" } ], "references": [ { "identifier": "GEO:GSM2857900" }, { "identifier": "GEO:GSM2857899" }, { "identifier": "PUBMED:30104650" }, { "identifier": "GEO:GSM2857898" }, { "identifier": "GEO:GSE106942" }, { "identifier": "GTRD:EXP048501" } ], "species": { "name": "Arabidopsis thaliana" } }, "jaspar_id": "MA1415.1", "bed_filename": "macs/DAMO/EXP048501.flowers_5-week-old_plants.REF6/EXP048501.flowers_5-week-old_plants.REF6.MA1415.1.damo.bed", "fasta_filename": "macs/DAMO/EXP048501.flowers_5-week-old_plants.REF6/EXP048501.flowers_5-week-old_plants.REF6.MA1415.1.damo.fa", "profile_name": "REF6", "synonyms": [ "AT3G48430", "JMJ12", "Jumonji domain-containing protein 12", "relative of early flowering 6" ] }, { "folder": { "folder": "EXP052650.14_day_old_seedling.IDD4", "tf_name": "IDD4", "samples": [ { "cell": { "title": "14 day old seedling" }, "biological_condition": "Conditions: long-day conditions Treatment: 1uM flg22 treatment for 1 hour Genotype: ColO, pUBI10::IDD4:GFP" } ], "references": [ { "identifier": "GEO:GSE120068" }, { "identifier": "GEO:GSM3392896" }, { "identifier": "GTRD:EXP052650" } ], "species": { "name": "Arabidopsis thaliana" } }, "jaspar_id": "MA1371.1", "bed_filename": "macs/DAMO/EXP052650.14_day_old_seedling.IDD4/EXP052650.14_day_old_seedling.IDD4.MA1371.1.damo.bed", "fasta_filename": "macs/DAMO/EXP052650.14_day_old_seedling.IDD4/EXP052650.14_day_old_seedling.IDD4.MA1371.1.damo.fa", "profile_name": "IDD4", "synonyms": [ "AT2G02080", "AtIDD4", "F5O4.15", "F5O4_15", "indeterminate(ID)-domain 4" ] } ] }