Specific Datasets List
This API provides an easy-to-use REST web interface to query/retrieve data
from the UniBind database. The API comes with a human browsable interface and
also a programmatic interface which return the results in different formats,
including
json, jsonp, yaml,
bed, and also api for a browsable interface.
GET /api/v1/specific/?collection=Robust&format=api&page=496&q=&species=10090&summary=true
{ "count": 4955, "next": null, "previous": "https://unibind.uio.no/api/v1/specific/?collection=Robust&format=api&page=495&q=&species=10090&summary=true", "results": [ { "folder": { "folder": "EXP059871.E14TG2A_embryonic_stem_cells.CTCF", "tf_name": "CTCF", "samples": [ { "cell": { "title": "E14TG2A (embryonic stem cells)" }, "biological_condition": "Conditions: cultured in 2i medium for 3 days;" } ], "references": [ { "identifier": "GEO:GSE92407" }, { "identifier": "PUBMED:31036938" }, { "identifier": "GEO:GSM3615252" }, { "identifier": "GEO:GSM3615251" }, { "identifier": "GTRD:EXP059871" } ], "species": { "name": "Mus musculus" } }, "jaspar_id": "MA0139.1", "bed_filename": "macs/DAMO/EXP059871.E14TG2A_embryonic_stem_cells.CTCF/EXP059871.E14TG2A_embryonic_stem_cells.CTCF.MA0139.1.damo.bed", "fasta_filename": "macs/DAMO/EXP059871.E14TG2A_embryonic_stem_cells.CTCF/EXP059871.E14TG2A_embryonic_stem_cells.CTCF.MA0139.1.damo.fa", "profile_name": "CTCF", "synonyms": [ "11 zinc finger transcriptional repressor", "11-zinc finger protein", "CCCTC-binding factor", "CCCTC-binding factor (zinc finger protein)", "CFAP108", "CTCFL paralog", "FAP108", "MRD21", "transcriptional repressor CTCF" ] }, { "folder": { "folder": "EXP059872.E14TG2A_embryonic_stem_cells.CTCF", "tf_name": "CTCF", "samples": [ { "cell": { "title": "E14TG2A (embryonic stem cells)" }, "biological_condition": "Conditions: cultured in EpiLSCs medium;" } ], "references": [ { "identifier": "GEO:GSE92407" }, { "identifier": "GEO:GSM3615253" }, { "identifier": "PUBMED:31036938" }, { "identifier": "GEO:GSM3615254" }, { "identifier": "GTRD:EXP059872" } ], "species": { "name": "Mus musculus" } }, "jaspar_id": "MA0139.1", "bed_filename": "macs/DAMO/EXP059872.E14TG2A_embryonic_stem_cells.CTCF/EXP059872.E14TG2A_embryonic_stem_cells.CTCF.MA0139.1.damo.bed", "fasta_filename": "macs/DAMO/EXP059872.E14TG2A_embryonic_stem_cells.CTCF/EXP059872.E14TG2A_embryonic_stem_cells.CTCF.MA0139.1.damo.fa", "profile_name": "CTCF", "synonyms": [ "11 zinc finger transcriptional repressor", "11-zinc finger protein", "CCCTC-binding factor", "CCCTC-binding factor (zinc finger protein)", "CFAP108", "CTCFL paralog", "FAP108", "MRD21", "transcriptional repressor CTCF" ] }, { "folder": { "folder": "EXP059873.E14TG2A_embryonic_stem_cells.CTCF", "tf_name": "CTCF", "samples": [ { "cell": { "title": "E14TG2A (embryonic stem cells)" }, "biological_condition": "Conditions: cultured in serum medium;" } ], "references": [ { "identifier": "GEO:GSM3615255" }, { "identifier": "GEO:GSM3615256" }, { "identifier": "PUBMED:31036938" }, { "identifier": "GEO:GSE92407" }, { "identifier": "GTRD:EXP059873" } ], "species": { "name": "Mus musculus" } }, "jaspar_id": "MA0139.1", "bed_filename": "macs/DAMO/EXP059873.E14TG2A_embryonic_stem_cells.CTCF/EXP059873.E14TG2A_embryonic_stem_cells.CTCF.MA0139.1.damo.bed", "fasta_filename": "macs/DAMO/EXP059873.E14TG2A_embryonic_stem_cells.CTCF/EXP059873.E14TG2A_embryonic_stem_cells.CTCF.MA0139.1.damo.fa", "profile_name": "CTCF", "synonyms": [ "11 zinc finger transcriptional repressor", "11-zinc finger protein", "CCCTC-binding factor", "CCCTC-binding factor (zinc finger protein)", "CFAP108", "CTCFL paralog", "FAP108", "MRD21", "transcriptional repressor CTCF" ] }, { "folder": { "folder": "EXP059878.E14TG2A_embryonic_stem_cells.YY1", "tf_name": "YY1", "samples": [ { "cell": { "title": "E14TG2A (embryonic stem cells)" }, "biological_condition": "Conditions: cultured in EpiLSCs medium;" } ], "references": [ { "identifier": "PUBMED:31036938" }, { "identifier": "GEO:GSE92407" }, { "identifier": "GEO:GSM3615266" }, { "identifier": "GEO:GSM3615265" }, { "identifier": "GTRD:EXP059878" } ], "species": { "name": "Mus musculus" } }, "jaspar_id": "MA0095.2", "bed_filename": "macs/DAMO/EXP059878.E14TG2A_embryonic_stem_cells.YY1/EXP059878.E14TG2A_embryonic_stem_cells.YY1.MA0095.2.damo.bed", "fasta_filename": "macs/DAMO/EXP059878.E14TG2A_embryonic_stem_cells.YY1/EXP059878.E14TG2A_embryonic_stem_cells.YY1.MA0095.2.damo.fa", "profile_name": "YY1", "synonyms": [ "DELTA", "GADEVS", "INO80 complex subunit S", "INO80S", "NF-E1", "UCRBP", "YIN-YANG-1", "YY-1", "YY1 transcription factor", "Yin and Yang 1 protein", "delta transcription factor", "transcriptional repressor protein YY1" ] }, { "folder": { "folder": "EXP059883.retinal_progenitor_cells.LHX2", "tf_name": "LHX2", "samples": [ { "cell": { "title": "retinal progenitor cells" }, "biological_condition": "Treatment: transgene Chx10-Cre eGFP; Developmental stage: post-natal day 2; Strain: CD1; Genotype: Lhx2 knockout;" } ], "references": [ { "identifier": "GEO:GSE99818" }, { "identifier": "PUBMED:31044167" }, { "identifier": "GEO:GSM2653454" }, { "identifier": "GTRD:EXP059883" } ], "species": { "name": "Mus musculus" } }, "jaspar_id": "MA0700.2", "bed_filename": "macs/DAMO/EXP059883.retinal_progenitor_cells.LHX2/EXP059883.retinal_progenitor_cells.LHX2.MA0700.2.damo.bed", "fasta_filename": "macs/DAMO/EXP059883.retinal_progenitor_cells.LHX2/EXP059883.retinal_progenitor_cells.LHX2.MA0700.2.damo.fa", "profile_name": "LHX2", "synonyms": [ "LH2", "LIM HOX gene 2", "LIM homeobox 2", "LIM homeobox protein 2", "LIM/homeobox protein Lhx2", "hLhx2", "homeobox protein LH-2" ] } ] }