Specific Datasets List
This API provides an easy-to-use REST web interface to query/retrieve data
from the UniBind database. The API comes with a human browsable interface and
also a programmatic interface which return the results in different formats,
including
json, jsonp, yaml,
bed, and also api for a browsable interface.
GET /api/v1/specific/?collection=Robust&format=api&page=4&q=&species=3702&summary=true
{ "count": 78, "next": "https://unibind.uio.no/api/v1/specific/?collection=Robust&format=api&page=5&q=&species=3702&summary=true", "previous": "https://unibind.uio.no/api/v1/specific/?collection=Robust&format=api&page=3&q=&species=3702&summary=true", "results": [ { "folder": { "folder": "EXP041354.complete_15_day-old_seedlings.LFY", "tf_name": "LFY", "samples": [ { "cell": { "title": "complete 15 day-old seedlings" }, "biological_condition": "p35S:LFY; CA26-15 strain" } ], "references": [ { "identifier": "GEO:GSM1566965" }, { "identifier": "GEO:GSE64245" }, { "identifier": "PUBMED:27097556" }, { "identifier": "GEO:GSM1566964" }, { "identifier": "GTRD:EXP041354" } ], "species": { "name": "Arabidopsis thaliana" } }, "jaspar_id": "MA0590.1", "bed_filename": "macs/DAMO/EXP041354.complete_15_day-old_seedlings.LFY/EXP041354.complete_15_day-old_seedlings.LFY.MA0590.1.damo.bed", "fasta_filename": "macs/DAMO/EXP041354.complete_15_day-old_seedlings.LFY/EXP041354.complete_15_day-old_seedlings.LFY.MA0590.1.damo.fa", "profile_name": "LFY", "synonyms": [ "AT5G61850", "LEAFY", "LEAFY 3", "LFY3", "MAC9.13", "MAC9_13", "floral meristem identity control protein LEAFY (LFY)" ] }, { "folder": { "folder": "EXP041355.complete_15_day-old_seedlings.LFY", "tf_name": "LFY", "samples": [ { "cell": { "title": "complete 15 day-old seedlings" }, "biological_condition": "p35S:LFYTERE; CA29-17 strain" } ], "references": [ { "identifier": "GEO:GSM1566966" }, { "identifier": "GEO:GSE64245" }, { "identifier": "GEO:GSM1566967" }, { "identifier": "PUBMED:27097556" }, { "identifier": "GTRD:EXP041355" } ], "species": { "name": "Arabidopsis thaliana" } }, "jaspar_id": "MA0590.1", "bed_filename": "macs/DAMO/EXP041355.complete_15_day-old_seedlings.LFY/EXP041355.complete_15_day-old_seedlings.LFY.MA0590.1.damo.bed", "fasta_filename": "macs/DAMO/EXP041355.complete_15_day-old_seedlings.LFY/EXP041355.complete_15_day-old_seedlings.LFY.MA0590.1.damo.fa", "profile_name": "LFY", "synonyms": [ "AT5G61850", "LEAFY", "LEAFY 3", "LFY3", "MAC9.13", "MAC9_13", "floral meristem identity control protein LEAFY (LFY)" ] }, { "folder": { "folder": "EXP041357.12_day_old_seedlings.REF6", "tf_name": "REF6", "samples": [ { "cell": { "title": "12 day old seedlings" }, "biological_condition": "REF6p::REF6-HA ref6-1" } ], "references": [ { "identifier": "GEO:GSE65329" }, { "identifier": "PUBMED:27111035" }, { "identifier": "GEO:GSM1592577" }, { "identifier": "GTRD:EXP041357" } ], "species": { "name": "Arabidopsis thaliana" } }, "jaspar_id": "MA1415.1", "bed_filename": "macs/DAMO/EXP041357.12_day_old_seedlings.REF6/EXP041357.12_day_old_seedlings.REF6.MA1415.1.damo.bed", "fasta_filename": "macs/DAMO/EXP041357.12_day_old_seedlings.REF6/EXP041357.12_day_old_seedlings.REF6.MA1415.1.damo.fa", "profile_name": "REF6", "synonyms": [ "AT3G48430", "JMJ12", "Jumonji domain-containing protein 12", "relative of early flowering 6" ] }, { "folder": { "folder": "EXP041366.4_week_old_mature_leaves.WRKY33", "tf_name": "WRKY33", "samples": [ { "cell": { "title": "4 week old mature leaves" }, "biological_condition": "14 hour post inoculation with spores of Botrytis cinerea 2100" } ], "references": [ { "identifier": "GEO:GSM1618745" }, { "identifier": "PUBMED:26076231" }, { "identifier": "GEO:GSE66289" }, { "identifier": "GEO:GSM1618746" }, { "identifier": "GTRD:EXP041366" } ], "species": { "name": "Arabidopsis thaliana" } }, "jaspar_id": "MA1301.1", "bed_filename": "macs/DAMO/EXP041366.4_week_old_mature_leaves.WRKY33/EXP041366.4_week_old_mature_leaves.WRKY33.MA1301.1.damo.bed", "fasta_filename": "macs/DAMO/EXP041366.4_week_old_mature_leaves.WRKY33/EXP041366.4_week_old_mature_leaves.WRKY33.MA1301.1.damo.fa", "profile_name": "WRKY33", "synonyms": [ "AT2G38470", "ATWRKY33", "T19C21.4", "T19C21_4", "WRKY DNA-BINDING PROTEIN 33", "WRKY DNA-binding protein 33" ] }, { "folder": { "folder": "EXP041373.5_day_old_seedlings.PIF4", "tf_name": "PIF4", "samples": [ { "cell": { "title": "5 day old seedlings" }, "biological_condition": "5 day white light, low blue for 16 hours" } ], "references": [ { "identifier": "GEO:GSE68193" }, { "identifier": "PUBMED:26724867" }, { "identifier": "GEO:GSM1665427" }, { "identifier": "GEO:GSM1665428" }, { "identifier": "GEO:GSM1665429" }, { "identifier": "GTRD:EXP041373" } ], "species": { "name": "Arabidopsis thaliana" } }, "jaspar_id": "MA0561.1", "bed_filename": "macs/DAMO/EXP041373.5_day_old_seedlings.PIF4/EXP041373.5_day_old_seedlings.PIF4.MA0561.1.damo.bed", "fasta_filename": "macs/DAMO/EXP041373.5_day_old_seedlings.PIF4/EXP041373.5_day_old_seedlings.PIF4.MA0561.1.damo.fa", "profile_name": "PIF4", "synonyms": [ "AT2G43010", "AtPIF4", "MFL8.13", "MFL8_13", "SRL2", "phytochrome interacting factor 4" ] }, { "folder": { "folder": "EXP041374.5_day_old_seedlings.PIF5", "tf_name": "PIF5", "samples": [ { "cell": { "title": "5 day old seedlings" }, "biological_condition": "5 day white light, low blue for 16 hours" } ], "references": [ { "identifier": "GEO:GSM1977462" }, { "identifier": "GEO:GSE68193" }, { "identifier": "PUBMED:26724867" }, { "identifier": "GEO:GSM1977463" }, { "identifier": "GTRD:EXP041374" } ], "species": { "name": "Arabidopsis thaliana" } }, "jaspar_id": "MA0562.1", "bed_filename": "macs/DAMO/EXP041374.5_day_old_seedlings.PIF5/EXP041374.5_day_old_seedlings.PIF5.MA0562.1.damo.bed", "fasta_filename": "macs/DAMO/EXP041374.5_day_old_seedlings.PIF5/EXP041374.5_day_old_seedlings.PIF5.MA0562.1.damo.fa", "profile_name": "PIF5", "synonyms": [ "AT3G59060", "PHYTOCHROME-INTERACTING FACTOR 5", "PIF5", "phytochrome interacting factor 3-like 6" ] }, { "folder": { "folder": "EXP041376.Inflorescence_containing_stage_8_and_younger_flowers.FHY3", "tf_name": "FHY3", "samples": [ { "cell": { "title": "Inflorescence containing stage 8 and younger flowers" }, "biological_condition": "" } ], "references": [ { "identifier": "GEO:GSE69422" }, { "identifier": "GEO:GSM1701005" }, { "identifier": "PUBMED:27469166" }, { "identifier": "GEO:GSM1701006" }, { "identifier": "GTRD:EXP041376" } ], "species": { "name": "Arabidopsis thaliana" } }, "jaspar_id": "MA0557.1", "bed_filename": "macs/DAMO/EXP041376.Inflorescence_containing_stage_8_and_younger_flowers.FHY3/EXP041376.Inflorescence_containing_stage_8_and_younger_flowers.FHY3.MA0557.1.damo.bed", "fasta_filename": "macs/DAMO/EXP041376.Inflorescence_containing_stage_8_and_younger_flowers.FHY3/EXP041376.Inflorescence_containing_stage_8_and_younger_flowers.FHY3.MA0557.1.damo.fa", "profile_name": "FHY3", "synonyms": [ "AT3G22170", "CHLOROPLAST DIVISION MUTANT 45", "CPD45", "far-red elongated hypocotyls 3" ] }, { "folder": { "folder": "EXP041386.14_day_old_seedling.CCA1", "tf_name": "CCA1", "samples": [ { "cell": { "title": "14 day old seedling" }, "biological_condition": "Constant Light after entrainment in 12h:12h Light: Dark; ZT2" } ], "references": [ { "identifier": "GEO:GSM1808449" }, { "identifier": "GEO:GSM1808450" }, { "identifier": "PUBMED:26261339" }, { "identifier": "GEO:GSE70533" }, { "identifier": "GEO:GSM1808451" }, { "identifier": "GTRD:EXP041386" } ], "species": { "name": "Arabidopsis thaliana" } }, "jaspar_id": "MA0972.1", "bed_filename": "macs/DAMO/EXP041386.14_day_old_seedling.CCA1/EXP041386.14_day_old_seedling.CCA1.MA0972.1.damo.bed", "fasta_filename": "macs/DAMO/EXP041386.14_day_old_seedling.CCA1/EXP041386.14_day_old_seedling.CCA1.MA0972.1.damo.fa", "profile_name": "CCA1", "synonyms": [ "AT2G46830", "AtCCA1", "F19D11.11", "MYB-RELATED DNA BINDING PROTEIN", "circadian clock associated 1" ] }, { "folder": { "folder": "EXP041387.14_day_old_seedling.CCA1", "tf_name": "CCA1", "samples": [ { "cell": { "title": "14 day old seedling" }, "biological_condition": "Diel 12h:12h Light:Dark; ZT2" } ], "references": [ { "identifier": "PUBMED:26261339" }, { "identifier": "GEO:GSM1808452" }, { "identifier": "GEO:GSM1808453" }, { "identifier": "GEO:GSE70533" }, { "identifier": "GTRD:EXP041387" } ], "species": { "name": "Arabidopsis thaliana" } }, "jaspar_id": "MA0972.1", "bed_filename": "macs/DAMO/EXP041387.14_day_old_seedling.CCA1/EXP041387.14_day_old_seedling.CCA1.MA0972.1.damo.bed", "fasta_filename": "macs/DAMO/EXP041387.14_day_old_seedling.CCA1/EXP041387.14_day_old_seedling.CCA1.MA0972.1.damo.fa", "profile_name": "CCA1", "synonyms": [ "AT2G46830", "AtCCA1", "F19D11.11", "MYB-RELATED DNA BINDING PROTEIN", "circadian clock associated 1" ] }, { "folder": { "folder": "EXP041391.transition_apices.SOC1", "tf_name": "SOC1", "samples": [ { "cell": { "title": "transition apices" }, "biological_condition": "SOC1p:gSOC1-GFP;soc1-2; 15 days SD + 3 days LD" } ], "references": [ { "identifier": "GEO:GSM1116506" }, { "identifier": "PUBMED:22791302" }, { "identifier": "GEO:GSE45846" }, { "identifier": "GTRD:EXP041391" } ], "species": { "name": "Arabidopsis thaliana" } }, "jaspar_id": "MA0554.1", "bed_filename": "macs/DAMO/EXP041391.transition_apices.SOC1/EXP041391.transition_apices.SOC1.MA0554.1.damo.bed", "fasta_filename": "macs/DAMO/EXP041391.transition_apices.SOC1/EXP041391.transition_apices.SOC1.MA0554.1.damo.fa", "profile_name": "SOC1", "synonyms": [ "AGAMOUS-like 20", "AT2G45660", "ATSOC1", "F17K2.19", "MADS-BOX PROTEIN AGL20", "SOC1", "SUPPRESSOR OF OVEREXPRESSION OF CO 1" ] } ] }