Specific Datasets List
This API provides an easy-to-use REST web interface to query/retrieve data
from the UniBind database. The API comes with a human browsable interface and
also a programmatic interface which return the results in different formats,
including
json, jsonp, yaml,
bed, and also api for a browsable interface.
GET /api/v1/specific/?collection=Robust&format=api&page=4&q=&species=10090&summary=true
{ "count": 4955, "next": "https://unibind.uio.no/api/v1/specific/?collection=Robust&format=api&page=5&q=&species=10090&summary=true", "previous": "https://unibind.uio.no/api/v1/specific/?collection=Robust&format=api&page=3&q=&species=10090&summary=true", "results": [ { "folder": { "folder": "EXP000043.3T3-L1-derived_preadipocytes.CTCF", "tf_name": "CTCF", "samples": [ { "cell": { "title": "3T3-L1-derived preadipocytes" }, "biological_condition": "" } ], "references": [ { "identifier": "GEO:GSE21365" }, { "identifier": "GEO:GSM535747" }, { "identifier": "PUBMED:20887899" }, { "identifier": "GEO:GSM535754" }, { "identifier": "GTRD:EXP000043" } ], "species": { "name": "Mus musculus" } }, "jaspar_id": "MA0139.1", "bed_filename": "macs/DAMO/EXP000043.3T3-L1-derived_preadipocytes.CTCF/EXP000043.3T3-L1-derived_preadipocytes.CTCF.MA0139.1.damo.bed", "fasta_filename": "macs/DAMO/EXP000043.3T3-L1-derived_preadipocytes.CTCF/EXP000043.3T3-L1-derived_preadipocytes.CTCF.MA0139.1.damo.fa", "profile_name": "CTCF", "synonyms": [ "11 zinc finger transcriptional repressor", "11-zinc finger protein", "CCCTC-binding factor", "CCCTC-binding factor (zinc finger protein)", "CFAP108", "CTCFL paralog", "FAP108", "MRD21", "transcriptional repressor CTCF" ] }, { "folder": { "folder": "EXP000044.3T3-L1-derived_adipocytes.CTCF", "tf_name": "CTCF", "samples": [ { "cell": { "title": "3T3-L1-derived adipocytes" }, "biological_condition": "" } ], "references": [ { "identifier": "GEO:GSE21365" }, { "identifier": "PUBMED:20887899" }, { "identifier": "GEO:GSM535761" }, { "identifier": "GEO:GSM535768" }, { "identifier": "GTRD:EXP000044" } ], "species": { "name": "Mus musculus" } }, "jaspar_id": "MA0139.1", "bed_filename": "macs/DAMO/EXP000044.3T3-L1-derived_adipocytes.CTCF/EXP000044.3T3-L1-derived_adipocytes.CTCF.MA0139.1.damo.bed", "fasta_filename": "macs/DAMO/EXP000044.3T3-L1-derived_adipocytes.CTCF/EXP000044.3T3-L1-derived_adipocytes.CTCF.MA0139.1.damo.fa", "profile_name": "CTCF", "synonyms": [ "11 zinc finger transcriptional repressor", "11-zinc finger protein", "CCCTC-binding factor", "CCCTC-binding factor (zinc finger protein)", "CFAP108", "CTCFL paralog", "FAP108", "MRD21", "transcriptional repressor CTCF" ] }, { "folder": { "folder": "EXP000045.3T3-L1_embryonic_fibroblasts.CEBPB", "tf_name": "CEBPB", "samples": [ { "cell": { "title": "3T3-L1 (embryonic fibroblasts)" }, "biological_condition": "" } ], "references": [ { "identifier": "GEO:GSE21898" }, { "identifier": "PUBMED:20478996" }, { "identifier": "GEO:GSM544720" }, { "identifier": "GTRD:EXP000045" } ], "species": { "name": "Mus musculus" } }, "jaspar_id": "MA0466.2", "bed_filename": "macs/DAMO/EXP000045.3T3-L1_embryonic_fibroblasts.CEBPB/EXP000045.3T3-L1_embryonic_fibroblasts.CEBPB.MA0466.2.damo.bed", "fasta_filename": "macs/DAMO/EXP000045.3T3-L1_embryonic_fibroblasts.CEBPB/EXP000045.3T3-L1_embryonic_fibroblasts.CEBPB.MA0466.2.damo.fa", "profile_name": "CEBPB", "synonyms": [ "C/EBP-beta", "CCAAT enhancer binding protein beta", "CCAAT/enhancer binding protein (C/EBP), beta", "CCAAT/enhancer-binding protein beta", "IL6DBP", "NF-IL6", "TCF5", "interleukin 6-dependent DNA-binding protein", "nuclear factor NF-IL6", "nuclear factor of interleukin 6", "transcription factor 5", "transcription factor C/EBP beta" ] }, { "folder": { "folder": "EXP000046.3T3-L1-derived_preadipocytes.CEBPB", "tf_name": "CEBPB", "samples": [ { "cell": { "title": "3T3-L1-derived preadipocytes" }, "biological_condition": "" } ], "references": [ { "identifier": "GEO:GSE21898" }, { "identifier": "PUBMED:20478996" }, { "identifier": "GEO:GSM544721" }, { "identifier": "GTRD:EXP000046" } ], "species": { "name": "Mus musculus" } }, "jaspar_id": "MA0466.2", "bed_filename": "macs/DAMO/EXP000046.3T3-L1-derived_preadipocytes.CEBPB/EXP000046.3T3-L1-derived_preadipocytes.CEBPB.MA0466.2.damo.bed", "fasta_filename": "macs/DAMO/EXP000046.3T3-L1-derived_preadipocytes.CEBPB/EXP000046.3T3-L1-derived_preadipocytes.CEBPB.MA0466.2.damo.fa", "profile_name": "CEBPB", "synonyms": [ "C/EBP-beta", "CCAAT enhancer binding protein beta", "CCAAT/enhancer binding protein (C/EBP), beta", "CCAAT/enhancer-binding protein beta", "IL6DBP", "NF-IL6", "TCF5", "interleukin 6-dependent DNA-binding protein", "nuclear factor NF-IL6", "nuclear factor of interleukin 6", "transcription factor 5", "transcription factor C/EBP beta" ] }, { "folder": { "folder": "EXP000047.3T3-L1-derived_preadipocytes.NR3C1", "tf_name": "NR3C1", "samples": [ { "cell": { "title": "3T3-L1-derived preadipocytes" }, "biological_condition": "" } ], "references": [ { "identifier": "GEO:GSE21898" }, { "identifier": "GEO:GSM544722" }, { "identifier": "PUBMED:20478996" }, { "identifier": "GTRD:EXP000047" } ], "species": { "name": "Mus musculus" } }, "jaspar_id": "MA0113.3", "bed_filename": "macs/DAMO/EXP000047.3T3-L1-derived_preadipocytes.NR3C1/EXP000047.3T3-L1-derived_preadipocytes.NR3C1.MA0113.3.damo.bed", "fasta_filename": "macs/DAMO/EXP000047.3T3-L1-derived_preadipocytes.NR3C1/EXP000047.3T3-L1-derived_preadipocytes.NR3C1.MA0113.3.damo.fa", "profile_name": "NR3C1", "synonyms": [ "GCCR", "GCR", "GCRST", "GR", "GRL", "glucocorticoid nuclear receptor variant 1", "glucocorticoid receptor", "nuclear receptor subfamily 3 group C member 1", "nuclear receptor subfamily 3 group C member 1 variant hGR-B(54)", "nuclear receptor subfamily 3 group C member 1 variant hGR-B(77)", "nuclear receptor subfamily 3 group C member 1 variant hGR-B(93)", "nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)" ] }, { "folder": { "folder": "EXP000054.Th2-cells.STAT6", "tf_name": "STAT6", "samples": [ { "cell": { "title": "Th2-cells" }, "biological_condition": "" } ], "references": [ { "identifier": "PUBMED:20620946" }, { "identifier": "GEO:GSE22104" }, { "identifier": "GEO:GSM550311" }, { "identifier": "GTRD:EXP000054" } ], "species": { "name": "Mus musculus" } }, "jaspar_id": "MA0520.1", "bed_filename": "macs/DAMO/EXP000054.Th2-cells.STAT6/EXP000054.Th2-cells.STAT6.MA0520.1.damo.bed", "fasta_filename": "macs/DAMO/EXP000054.Th2-cells.STAT6/EXP000054.Th2-cells.STAT6.MA0520.1.damo.fa", "profile_name": "Stat6", "synonyms": [ "signal transducer and activator of transcription 6", "signal transducer and transcription activator 6" ] }, { "folder": { "folder": "EXP000082.R1E_embryonic_stem_cells.CTCF", "tf_name": "CTCF", "samples": [ { "cell": { "title": "R1/E (embryonic stem cells)" }, "biological_condition": "" } ], "references": [ { "identifier": "GEO:GSE25777" }, { "identifier": "GEO:GSM634247" }, { "identifier": "PUBMED:21589869" }, { "identifier": "GTRD:EXP000082" } ], "species": { "name": "Mus musculus" } }, "jaspar_id": "MA0139.1", "bed_filename": "macs/DAMO/EXP000082.R1E_embryonic_stem_cells.CTCF/EXP000082.R1E_embryonic_stem_cells.CTCF.MA0139.1.damo.bed", "fasta_filename": "macs/DAMO/EXP000082.R1E_embryonic_stem_cells.CTCF/EXP000082.R1E_embryonic_stem_cells.CTCF.MA0139.1.damo.fa", "profile_name": "CTCF", "synonyms": [ "11 zinc finger transcriptional repressor", "11-zinc finger protein", "CCCTC-binding factor", "CCCTC-binding factor (zinc finger protein)", "CFAP108", "CTCFL paralog", "FAP108", "MRD21", "transcriptional repressor CTCF" ] }, { "folder": { "folder": "EXP000086.Lin-_bone_marrow_hematopoietic_progenitor_cells.GATA2", "tf_name": "GATA2", "samples": [ { "cell": { "title": "Lin- bone marrow hematopoietic progenitor cells" }, "biological_condition": "" } ], "references": [ { "identifier": "GEO:GSE26031" }, { "identifier": "GEO:GSM641911" }, { "identifier": "PUBMED:21186366" }, { "identifier": "GTRD:EXP000086" } ], "species": { "name": "Mus musculus" } }, "jaspar_id": "MA0036.3", "bed_filename": "macs/DAMO/EXP000086.Lin-_bone_marrow_hematopoietic_progenitor_cells.GATA2/EXP000086.Lin-_bone_marrow_hematopoietic_progenitor_cells.GATA2.MA0036.3.damo.bed", "fasta_filename": "macs/DAMO/EXP000086.Lin-_bone_marrow_hematopoietic_progenitor_cells.GATA2/EXP000086.Lin-_bone_marrow_hematopoietic_progenitor_cells.GATA2.MA0036.3.damo.fa", "profile_name": "GATA2", "synonyms": [ "DCML", "GATA binding protein 2", "IMD21", "MONOMAC", "NFE1B", "endothelial transcription factor GATA-2" ] }, { "folder": { "folder": "EXP000088.pro-B_cells.CTCF", "tf_name": "CTCF", "samples": [ { "cell": { "title": "pro-B cells" }, "biological_condition": "" } ], "references": [ { "identifier": "GEO:GSM644975" }, { "identifier": "PUBMED:21606361" }, { "identifier": "GEO:GSE26257" }, { "identifier": "GTRD:EXP000088" } ], "species": { "name": "Mus musculus" } }, "jaspar_id": "MA0139.1", "bed_filename": "macs/DAMO/EXP000088.pro-B_cells.CTCF/EXP000088.pro-B_cells.CTCF.MA0139.1.damo.bed", "fasta_filename": "macs/DAMO/EXP000088.pro-B_cells.CTCF/EXP000088.pro-B_cells.CTCF.MA0139.1.damo.fa", "profile_name": "CTCF", "synonyms": [ "11 zinc finger transcriptional repressor", "11-zinc finger protein", "CCCTC-binding factor", "CCCTC-binding factor (zinc finger protein)", "CFAP108", "CTCFL paralog", "FAP108", "MRD21", "transcriptional repressor CTCF" ] }, { "folder": { "folder": "EXP000091.Th17-cells.STAT3", "tf_name": "STAT3", "samples": [ { "cell": { "title": "Th17-cells" }, "biological_condition": "" } ], "references": [ { "identifier": "GEO:GSM652877" }, { "identifier": "PUBMED:21278738" }, { "identifier": "GEO:GSE26552" }, { "identifier": "GTRD:EXP000091" } ], "species": { "name": "Mus musculus" } }, "jaspar_id": "MA0144.2", "bed_filename": "macs/DAMO/EXP000091.Th17-cells.STAT3/EXP000091.Th17-cells.STAT3.MA0144.2.damo.bed", "fasta_filename": "macs/DAMO/EXP000091.Th17-cells.STAT3/EXP000091.Th17-cells.STAT3.MA0144.2.damo.fa", "profile_name": "STAT3", "synonyms": [ "ADMIO", "ADMIO1", "APRF", "DNA-binding protein APRF", "HIES", "acute-phase response factor", "signal transducer and activator of transcription 3" ] } ] }