Specific Datasets List
This API provides an easy-to-use REST web interface to query/retrieve data
from the UniBind database. The API comes with a human browsable interface and
also a programmatic interface which return the results in different formats,
including
json, jsonp, yaml,
bed, and also api for a browsable interface.
GET /api/v1/specific/?collection=Robust&format=api&page=3&q=&species=3702&summary=true
{ "count": 78, "next": "https://unibind.uio.no/api/v1/specific/?collection=Robust&format=api&page=4&q=&species=3702&summary=true", "previous": "https://unibind.uio.no/api/v1/specific/?collection=Robust&format=api&page=2&q=&species=3702&summary=true", "results": [ { "folder": { "folder": "EXP041276.inflorescence.AG", "tf_name": "AG", "samples": [ { "cell": { "title": "inflorescence" }, "biological_condition": "AG-GFP AP1-GR ap1 cal; 4 days after Dexamethasone treatment (early-intermediate floral stage ~ stage 4-5 flowers)" } ], "references": [ { "identifier": "PUBMED:23821642" }, { "identifier": "GEO:GSE45938" }, { "identifier": "GEO:GSM1120015" }, { "identifier": "GEO:GSM1120014" }, { "identifier": "GTRD:EXP041276" } ], "species": { "name": "Arabidopsis thaliana" } }, "jaspar_id": "MA0005.2", "bed_filename": "macs/DAMO/EXP041276.inflorescence.AG/EXP041276.inflorescence.AG.MA0005.2.damo.bed", "fasta_filename": "macs/DAMO/EXP041276.inflorescence.AG/EXP041276.inflorescence.AG.MA0005.2.damo.fa", "profile_name": "AG", "synonyms": [ "AGAMOUS", "AGAMOUS PROTEIN", "AT4G18960", "F13C5.130", "F13C5_130", "K-box region and MADS-box transcription factor family protein" ] }, { "folder": { "folder": "EXP041280.inflorescence.SEP3", "tf_name": "SEP3", "samples": [ { "cell": { "title": "inflorescence" }, "biological_condition": "4 days after DEX" } ], "references": [ { "identifier": "GEO:GSM1142624" }, { "identifier": "PUBMED:24581456" }, { "identifier": "GEO:GSE46986" }, { "identifier": "GTRD:EXP041280" } ], "species": { "name": "Arabidopsis thaliana" } }, "jaspar_id": "MA0563.1", "bed_filename": "macs/DAMO/EXP041280.inflorescence.SEP3/EXP041280.inflorescence.SEP3.MA0563.1.damo.bed", "fasta_filename": "macs/DAMO/EXP041280.inflorescence.SEP3/EXP041280.inflorescence.SEP3.MA0563.1.damo.fa", "profile_name": "SEP3", "synonyms": [ "AGAMOUS-like 9", "AGL9", "AT1G24260", "F3I6.19", "F3I6_19", "K-box region and MADS-box transcription factor family protein", "SEPALLATA3", "TRANSCRIPTION FACTOR AGL9" ] }, { "folder": { "folder": "EXP041281.inflorescence.SEP3", "tf_name": "SEP3", "samples": [ { "cell": { "title": "inflorescence" }, "biological_condition": "8 days after DEX" } ], "references": [ { "identifier": "GEO:GSE46986" }, { "identifier": "GEO:GSM1142625" }, { "identifier": "PUBMED:24581456" }, { "identifier": "GTRD:EXP041281" } ], "species": { "name": "Arabidopsis thaliana" } }, "jaspar_id": "MA0563.1", "bed_filename": "macs/DAMO/EXP041281.inflorescence.SEP3/EXP041281.inflorescence.SEP3.MA0563.1.damo.bed", "fasta_filename": "macs/DAMO/EXP041281.inflorescence.SEP3/EXP041281.inflorescence.SEP3.MA0563.1.damo.fa", "profile_name": "SEP3", "synonyms": [ "AGAMOUS-like 9", "AGL9", "AT1G24260", "F3I6.19", "F3I6_19", "K-box region and MADS-box transcription factor family protein", "SEPALLATA3", "TRANSCRIPTION FACTOR AGL9" ] }, { "folder": { "folder": "EXP041282.inflorescence.AP1", "tf_name": "AP1", "samples": [ { "cell": { "title": "inflorescence" }, "biological_condition": "4 days after DEX" } ], "references": [ { "identifier": "GEO:GSE46986" }, { "identifier": "GEO:GSM1142627" }, { "identifier": "PUBMED:24581456" }, { "identifier": "GTRD:EXP041282" } ], "species": { "name": "Arabidopsis thaliana" } }, "jaspar_id": "MA0940.1", "bed_filename": "macs/DAMO/EXP041282.inflorescence.AP1/EXP041282.inflorescence.AP1.MA0940.1.damo.bed", "fasta_filename": "macs/DAMO/EXP041282.inflorescence.AP1/EXP041282.inflorescence.AP1.MA0940.1.damo.fa", "profile_name": "AP1", "synonyms": [ "AGAMOUS-like 7", "AGL7", "APETALA1", "AT1G69120", "AtAP1", "F4N2.9", "F4N2_9", "FLORAL HOMEOTIC PROTEIN APETALA1", "K-box region and MADS-box transcription factor family protein" ] }, { "folder": { "folder": "EXP041283.inflorescence.AP1", "tf_name": "AP1", "samples": [ { "cell": { "title": "inflorescence" }, "biological_condition": "8 days after DEX" } ], "references": [ { "identifier": "PUBMED:24581456" }, { "identifier": "GEO:GSE46986" }, { "identifier": "GEO:GSM1142628" }, { "identifier": "GTRD:EXP041283" } ], "species": { "name": "Arabidopsis thaliana" } }, "jaspar_id": "MA0940.1", "bed_filename": "macs/DAMO/EXP041283.inflorescence.AP1/EXP041283.inflorescence.AP1.MA0940.1.damo.bed", "fasta_filename": "macs/DAMO/EXP041283.inflorescence.AP1/EXP041283.inflorescence.AP1.MA0940.1.damo.fa", "profile_name": "AP1", "synonyms": [ "AGAMOUS-like 7", "AGL7", "APETALA1", "AT1G69120", "AtAP1", "F4N2.9", "F4N2_9", "FLORAL HOMEOTIC PROTEIN APETALA1", "K-box region and MADS-box transcription factor family protein" ] }, { "folder": { "folder": "EXP041285.inflorescence.SEP3", "tf_name": "SEP3", "samples": [ { "cell": { "title": "inflorescence" }, "biological_condition": "2 days after DEX" } ], "references": [ { "identifier": "GEO:GSM1279838" }, { "identifier": "GEO:GSM1279839" }, { "identifier": "PUBMED:24581456" }, { "identifier": "GEO:GSE46986" }, { "identifier": "GTRD:EXP041285" } ], "species": { "name": "Arabidopsis thaliana" } }, "jaspar_id": "MA0563.1", "bed_filename": "macs/DAMO/EXP041285.inflorescence.SEP3/EXP041285.inflorescence.SEP3.MA0563.1.damo.bed", "fasta_filename": "macs/DAMO/EXP041285.inflorescence.SEP3/EXP041285.inflorescence.SEP3.MA0563.1.damo.fa", "profile_name": "SEP3", "synonyms": [ "AGAMOUS-like 9", "AGL9", "AT1G24260", "F3I6.19", "F3I6_19", "K-box region and MADS-box transcription factor family protein", "SEPALLATA3", "TRANSCRIPTION FACTOR AGL9" ] }, { "folder": { "folder": "EXP041287.10_day_old_seedlings.KAN1", "tf_name": "KAN1", "samples": [ { "cell": { "title": "10 day old seedlings" }, "biological_condition": "45 minutes DEX treatment" } ], "references": [ { "identifier": "GEO:GSE48081" }, { "identifier": "GEO:GSM1167537" }, { "identifier": "PUBMED:24155946" }, { "identifier": "GEO:GSM1167539" }, { "identifier": "GTRD:EXP041287" } ], "species": { "name": "Arabidopsis thaliana" } }, "jaspar_id": "MA1027.1", "bed_filename": "macs/DAMO/EXP041287.10_day_old_seedlings.KAN1/EXP041287.10_day_old_seedlings.KAN1.MA1027.1.damo.bed", "fasta_filename": "macs/DAMO/EXP041287.10_day_old_seedlings.KAN1/EXP041287.10_day_old_seedlings.KAN1.MA1027.1.damo.fa", "profile_name": "KAN1", "synonyms": [ "AT5G16560", "Homeodomain-like superfamily protein", "KAN1", "KANADI", "KANADI 1", "MQK4.31", "MQK4_31" ] }, { "folder": { "folder": "EXP041291.seedling.AGL27", "tf_name": "AGL27", "samples": [ { "cell": { "title": "seedling" }, "biological_condition": "" } ], "references": [ { "identifier": "GEO:GSM1167549" }, { "identifier": "PUBMED:24067612" }, { "identifier": "GEO:GSM1167552" }, { "identifier": "GEO:GSM1167551" }, { "identifier": "GEO:GSE48082" }, { "identifier": "GTRD:EXP041291" } ], "species": { "name": "Arabidopsis thaliana" } }, "jaspar_id": "MA1012.1", "bed_filename": "macs/DAMO/EXP041291.seedling.AGL27/EXP041291.seedling.AGL27.MA1012.1.damo.bed", "fasta_filename": "macs/DAMO/EXP041291.seedling.AGL27/EXP041291.seedling.AGL27.MA1012.1.damo.fa", "profile_name": "AGL27", "synonyms": [ "AGAMOUS-like 27", "AGL27", "AT1G77080", "FLM", "FLOWERING LOCUS M", "K-box region and MADS-box transcription factor family protein", "MADS AFFECTING FLOWERING 1" ] }, { "folder": { "folder": "EXP041292.seedling.AGL27", "tf_name": "AGL27", "samples": [ { "cell": { "title": "seedling" }, "biological_condition": "iFLM-beta splicing variant" } ], "references": [ { "identifier": "GEO:GSE48082" }, { "identifier": "GEO:GSM1167541" }, { "identifier": "PUBMED:24067612" }, { "identifier": "GEO:GSM1167547" }, { "identifier": "GTRD:EXP041292" } ], "species": { "name": "Arabidopsis thaliana" } }, "jaspar_id": "MA1012.1", "bed_filename": "macs/DAMO/EXP041292.seedling.AGL27/EXP041292.seedling.AGL27.MA1012.1.damo.bed", "fasta_filename": "macs/DAMO/EXP041292.seedling.AGL27/EXP041292.seedling.AGL27.MA1012.1.damo.fa", "profile_name": "AGL27", "synonyms": [ "AGAMOUS-like 27", "AGL27", "AT1G77080", "FLM", "FLOWERING LOCUS M", "K-box region and MADS-box transcription factor family protein", "MADS AFFECTING FLOWERING 1" ] }, { "folder": { "folder": "EXP041317.PSB-d_dark_growing_suspension_cells.E2FA", "tf_name": "E2FA", "samples": [ { "cell": { "title": "PSB-d dark growing suspension cells" }, "biological_condition": "" } ], "references": [ { "identifier": "GEO:GSM1291187" }, { "identifier": "PUBMED:24453163" }, { "identifier": "GEO:GSE53422" }, { "identifier": "GTRD:EXP041317" } ], "species": { "name": "Arabidopsis thaliana" } }, "jaspar_id": "MA1414.1", "bed_filename": "macs/DAMO/EXP041317.PSB-d_dark_growing_suspension_cells.E2FA/EXP041317.PSB-d_dark_growing_suspension_cells.E2FA.MA1414.1.damo.bed", "fasta_filename": "macs/DAMO/EXP041317.PSB-d_dark_growing_suspension_cells.E2FA/EXP041317.PSB-d_dark_growing_suspension_cells.E2FA.MA1414.1.damo.fa", "profile_name": "E2FA", "synonyms": [ "AT2G36010", "ATE2FA", "E2F TRANSCRIPTION FACTOR-3 E2F3", "E2F transcription factor 3", "F11F19.8", "F11F19_8" ] } ] }