Specific Datasets List
This API provides an easy-to-use REST web interface to query/retrieve data
from the UniBind database. The API comes with a human browsable interface and
also a programmatic interface which return the results in different formats,
including
json, jsonp, yaml,
bed, and also api for a browsable interface.
GET /api/v1/specific/?collection=Robust&format=api&page=3&q=&species=10116&summary=true
{ "count": 73, "next": "https://unibind.uio.no/api/v1/specific/?collection=Robust&format=api&page=4&q=&species=10116&summary=true", "previous": "https://unibind.uio.no/api/v1/specific/?collection=Robust&format=api&page=2&q=&species=10116&summary=true", "results": [ { "folder": { "folder": "EXP034510.oligodendrocyte_progenitors.TCF7L2", "tf_name": "TCF7L2", "samples": [ { "cell": { "title": "oligodendrocyte progenitors" }, "biological_condition": "T3 treated for 3 days" } ], "references": [ { "identifier": "GEO:GSM1587568" }, { "identifier": "PUBMED:26955760" }, { "identifier": "GEO:GSE65119" }, { "identifier": "GTRD:EXP034510" } ], "species": { "name": "Rattus norvegicus" } }, "jaspar_id": "MA0523.1", "bed_filename": "macs/DAMO/EXP034510.oligodendrocyte_progenitors.TCF7L2/EXP034510.oligodendrocyte_progenitors.TCF7L2.MA0523.1.damo.bed", "fasta_filename": "macs/DAMO/EXP034510.oligodendrocyte_progenitors.TCF7L2/EXP034510.oligodendrocyte_progenitors.TCF7L2.MA0523.1.damo.fa", "profile_name": "TCF7L2", "synonyms": [ "HMG box transcription factor 4", "T-cell factor 4", "T-cell-specific transcription factor 4", "TCF-4", "TCF4", "hTCF-4", "transcription factor 7 like 2", "transcription factor 7-like 2", "transcription factor 7-like 2 (T-cell specific, HMG-box)" ] }, { "folder": { "folder": "EXP035150.chondrosarcoma.SOX6", "tf_name": "SOX6", "samples": [ { "cell": { "title": "chondrosarcoma" }, "biological_condition": "" } ], "references": [ { "identifier": "PUBMED:26150426" }, { "identifier": "GEO:GSM1717476" }, { "identifier": "GEO:GSE70143" }, { "identifier": "GTRD:EXP035150" } ], "species": { "name": "Rattus norvegicus" } }, "jaspar_id": "MA0515.1", "bed_filename": "macs/DAMO/EXP035150.chondrosarcoma.SOX6/EXP035150.chondrosarcoma.SOX6.MA0515.1.damo.bed", "fasta_filename": "macs/DAMO/EXP035150.chondrosarcoma.SOX6/EXP035150.chondrosarcoma.SOX6.MA0515.1.damo.fa", "profile_name": "Sox6", "synonyms": [ "AI987981", "SOX-LZ", "SRY (sex determining region Y)-box 6", "SRY-box containing gene 6", "transcription factor SOX-6" ] }, { "folder": { "folder": "EXP035490.oligodendrocytes.SOX10", "tf_name": "SOX10", "samples": [ { "cell": { "title": "oligodendrocytes" }, "biological_condition": "" } ], "references": [ { "identifier": "GEO:GSM1869163" }, { "identifier": "GEO:GSE72725" }, { "identifier": "GTRD:EXP035490" } ], "species": { "name": "Rattus norvegicus" } }, "jaspar_id": "MA0442.2", "bed_filename": "macs/DAMO/EXP035490.oligodendrocytes.SOX10/EXP035490.oligodendrocytes.SOX10.MA0442.2.damo.bed", "fasta_filename": "macs/DAMO/EXP035490.oligodendrocytes.SOX10/EXP035490.oligodendrocytes.SOX10.MA0442.2.damo.fa", "profile_name": "SOX10", "synonyms": [ "DOM", "PCWH", "SOX-10", "SRY (sex determining region Y)-box 10", "SRY-box 10", "SRY-box transcription factor 10", "SRY-related HMG-box gene 10", "WS2E", "WS4", "WS4C", "dominant megacolon, mouse, human homolog of", "transcription factor SOX-10" ] }, { "folder": { "folder": "EXP036428.INS-1E_pancreatic_beta-cells.MLXIPL", "tf_name": "MLXIPL", "samples": [ { "cell": { "title": "INS-1E (pancreatic beta-cells)" }, "biological_condition": "" } ], "references": [ { "identifier": "GEO:GSE81628" }, { "identifier": "PUBMED:27545881" }, { "identifier": "GEO:GSM2159989" }, { "identifier": "GEO:GSM2159990" }, { "identifier": "GTRD:EXP036428" } ], "species": { "name": "Rattus norvegicus" } }, "jaspar_id": "MA0664.1", "bed_filename": "macs/DAMO/EXP036428.INS-1E_pancreatic_beta-cells.MLXIPL/EXP036428.INS-1E_pancreatic_beta-cells.MLXIPL.MA0664.1.damo.bed", "fasta_filename": "macs/DAMO/EXP036428.INS-1E_pancreatic_beta-cells.MLXIPL/EXP036428.INS-1E_pancreatic_beta-cells.MLXIPL.MA0664.1.damo.fa", "profile_name": "MLXIPL", "synonyms": [ "CHREBP", "MIO", "MLX", "MLX interacting protein like", "MONDOB", "Mlx interactor", "WBSCR14", "WS basic-helix-loop-helix leucine zipper protein", "WS-bHLH", "Williams Beuren syndrome chromosome region 14", "Williams-Beuren syndrome chromosome region 14 protein 1", "Williams-Beuren syndrome chromosome region 14 protein 2", "Williams-Beuren syndrome chromosome region 14 protein 3", "bHLHd14", "carbohydrate response element binding protein", "carbohydrate-responsive element-binding protein", "class D basic helix-loop-helix protein 14", "williams-Beuren syndrome chromosomal region 14 protein" ] }, { "folder": { "folder": "EXP036429.INS-1E_pancreatic_beta-cells.MLXIPL", "tf_name": "MLXIPL", "samples": [ { "cell": { "title": "INS-1E (pancreatic beta-cells)" }, "biological_condition": "2h glucose" } ], "references": [ { "identifier": "GEO:GSE81628" }, { "identifier": "GEO:GSM2159991" }, { "identifier": "GEO:GSM2159992" }, { "identifier": "PUBMED:27545881" }, { "identifier": "GTRD:EXP036429" } ], "species": { "name": "Rattus norvegicus" } }, "jaspar_id": "MA0664.1", "bed_filename": "macs/DAMO/EXP036429.INS-1E_pancreatic_beta-cells.MLXIPL/EXP036429.INS-1E_pancreatic_beta-cells.MLXIPL.MA0664.1.damo.bed", "fasta_filename": "macs/DAMO/EXP036429.INS-1E_pancreatic_beta-cells.MLXIPL/EXP036429.INS-1E_pancreatic_beta-cells.MLXIPL.MA0664.1.damo.fa", "profile_name": "MLXIPL", "synonyms": [ "CHREBP", "MIO", "MLX", "MLX interacting protein like", "MONDOB", "Mlx interactor", "WBSCR14", "WS basic-helix-loop-helix leucine zipper protein", "WS-bHLH", "Williams Beuren syndrome chromosome region 14", "Williams-Beuren syndrome chromosome region 14 protein 1", "Williams-Beuren syndrome chromosome region 14 protein 2", "Williams-Beuren syndrome chromosome region 14 protein 3", "bHLHd14", "carbohydrate response element binding protein", "carbohydrate-responsive element-binding protein", "class D basic helix-loop-helix protein 14", "williams-Beuren syndrome chromosomal region 14 protein" ] }, { "folder": { "folder": "EXP036430.INS-1E_pancreatic_beta-cells.MLXIPL", "tf_name": "MLXIPL", "samples": [ { "cell": { "title": "INS-1E (pancreatic beta-cells)" }, "biological_condition": "12h glucose" } ], "references": [ { "identifier": "GEO:GSM2159993" }, { "identifier": "PUBMED:27545881" }, { "identifier": "GEO:GSE81628" }, { "identifier": "GEO:GSM2159994" }, { "identifier": "GTRD:EXP036430" } ], "species": { "name": "Rattus norvegicus" } }, "jaspar_id": "MA0664.1", "bed_filename": "macs/DAMO/EXP036430.INS-1E_pancreatic_beta-cells.MLXIPL/EXP036430.INS-1E_pancreatic_beta-cells.MLXIPL.MA0664.1.damo.bed", "fasta_filename": "macs/DAMO/EXP036430.INS-1E_pancreatic_beta-cells.MLXIPL/EXP036430.INS-1E_pancreatic_beta-cells.MLXIPL.MA0664.1.damo.fa", "profile_name": "MLXIPL", "synonyms": [ "CHREBP", "MIO", "MLX", "MLX interacting protein like", "MONDOB", "Mlx interactor", "WBSCR14", "WS basic-helix-loop-helix leucine zipper protein", "WS-bHLH", "Williams Beuren syndrome chromosome region 14", "Williams-Beuren syndrome chromosome region 14 protein 1", "Williams-Beuren syndrome chromosome region 14 protein 2", "Williams-Beuren syndrome chromosome region 14 protein 3", "bHLHd14", "carbohydrate response element binding protein", "carbohydrate-responsive element-binding protein", "class D basic helix-loop-helix protein 14", "williams-Beuren syndrome chromosomal region 14 protein" ] }, { "folder": { "folder": "EXP036523.oligodendrocytes.OLIG2", "tf_name": "OLIG2", "samples": [ { "cell": { "title": "oligodendrocytes" }, "biological_condition": "" } ], "references": [ { "identifier": "GEO:GSE84011" }, { "identifier": "GEO:GSM2225636" }, { "identifier": "PUBMED:27733608" }, { "identifier": "GTRD:EXP036523" } ], "species": { "name": "Rattus norvegicus" } }, "jaspar_id": "MA0678.1", "bed_filename": "macs/DAMO/EXP036523.oligodendrocytes.OLIG2/EXP036523.oligodendrocytes.OLIG2.MA0678.1.damo.bed", "fasta_filename": "macs/DAMO/EXP036523.oligodendrocytes.OLIG2/EXP036523.oligodendrocytes.OLIG2.MA0678.1.damo.fa", "profile_name": "OLIG2", "synonyms": [ "BHLHB1", "OLIGO2", "PRKCBP2", "RACK17", "bHLHe19", "basic domain, helix-loop-helix protein, class B, 1", "class B basic helix-loop-helix protein 1", "class E basic helix-loop-helix protein 19", "human protein kinase C-binding protein RACK17", "oligodendrocyte lineage transcription factor 2", "oligodendrocyte transcription factor 2", "oligodendrocyte-specific bHLH transcription factor 2", "protein kinase C-binding protein 2" ] }, { "folder": { "folder": "EXP036524.oligodendrocytes.OLIG2", "tf_name": "OLIG2", "samples": [ { "cell": { "title": "oligodendrocytes" }, "biological_condition": "LPC (12.5 mM) for 6h" } ], "references": [ { "identifier": "PUBMED:27733608" }, { "identifier": "GEO:GSM2225637" }, { "identifier": "GEO:GSE84011" }, { "identifier": "GTRD:EXP036524" } ], "species": { "name": "Rattus norvegicus" } }, "jaspar_id": "MA0678.1", "bed_filename": "macs/DAMO/EXP036524.oligodendrocytes.OLIG2/EXP036524.oligodendrocytes.OLIG2.MA0678.1.damo.bed", "fasta_filename": "macs/DAMO/EXP036524.oligodendrocytes.OLIG2/EXP036524.oligodendrocytes.OLIG2.MA0678.1.damo.fa", "profile_name": "OLIG2", "synonyms": [ "BHLHB1", "OLIGO2", "PRKCBP2", "RACK17", "bHLHe19", "basic domain, helix-loop-helix protein, class B, 1", "class B basic helix-loop-helix protein 1", "class E basic helix-loop-helix protein 19", "human protein kinase C-binding protein RACK17", "oligodendrocyte lineage transcription factor 2", "oligodendrocyte transcription factor 2", "oligodendrocyte-specific bHLH transcription factor 2", "protein kinase C-binding protein 2" ] }, { "folder": { "folder": "EXP037001.hippocampal_neural_stem_cells.REST", "tf_name": "REST", "samples": [ { "cell": { "title": "hippocampal neural stem cells" }, "biological_condition": "quiescence" } ], "references": [ { "identifier": "PUBMED:27819263" }, { "identifier": "GEO:GSM1816596" }, { "identifier": "GEO:GSE70695" }, { "identifier": "GTRD:EXP037001" } ], "species": { "name": "Rattus norvegicus" } }, "jaspar_id": "MA0138.2", "bed_filename": "macs/DAMO/EXP037001.hippocampal_neural_stem_cells.REST/EXP037001.hippocampal_neural_stem_cells.REST.MA0138.2.damo.bed", "fasta_filename": "macs/DAMO/EXP037001.hippocampal_neural_stem_cells.REST/EXP037001.hippocampal_neural_stem_cells.REST.MA0138.2.damo.fa", "profile_name": "REST", "synonyms": [ "DFNA27", "GINGF5", "HGF5", "NRSF", "RE1 silencing transcription factor", "RE1-silencing transcription factor", "WT6", "XBR", "neural-restrictive silencer factor", "neuron restrictive silencer factor", "repressor binding to the X2 box" ] }, { "folder": { "folder": "EXP037002.hippocampal_neural_stem_cells.REST", "tf_name": "REST", "samples": [ { "cell": { "title": "hippocampal neural stem cells" }, "biological_condition": "quiescence" } ], "references": [ { "identifier": "GEO:GSM1816597" }, { "identifier": "PUBMED:27819263" }, { "identifier": "GEO:GSE70695" }, { "identifier": "GTRD:EXP037002" } ], "species": { "name": "Rattus norvegicus" } }, "jaspar_id": "MA0138.2", "bed_filename": "macs/DAMO/EXP037002.hippocampal_neural_stem_cells.REST/EXP037002.hippocampal_neural_stem_cells.REST.MA0138.2.damo.bed", "fasta_filename": "macs/DAMO/EXP037002.hippocampal_neural_stem_cells.REST/EXP037002.hippocampal_neural_stem_cells.REST.MA0138.2.damo.fa", "profile_name": "REST", "synonyms": [ "DFNA27", "GINGF5", "HGF5", "NRSF", "RE1 silencing transcription factor", "RE1-silencing transcription factor", "WT6", "XBR", "neural-restrictive silencer factor", "neuron restrictive silencer factor", "repressor binding to the X2 box" ] } ] }