Specific Datasets List
This API provides an easy-to-use REST web interface to query/retrieve data
from the UniBind database. The API comes with a human browsable interface and
also a programmatic interface which return the results in different formats,
including
json, jsonp, yaml,
bed, and also api for a browsable interface.
GET /api/v1/specific/?collection=Robust&format=api&page=2&q=&species=10116&summary=true
{ "count": 73, "next": "https://unibind.uio.no/api/v1/specific/?collection=Robust&format=api&page=3&q=&species=10116&summary=true", "previous": "https://unibind.uio.no/api/v1/specific/?collection=Robust&format=api&q=&species=10116&summary=true", "results": [ { "folder": { "folder": "EXP033400.H4-II-E_hepatocellular_carcinoma.HNF4A", "tf_name": "HNF4A", "samples": [ { "cell": { "title": "H4-II-E (hepatocellular carcinoma)" }, "biological_condition": "siRNA - Scrambled" } ], "references": [ { "identifier": "GEO:GSE53862" }, { "identifier": "PUBMED:25414334" }, { "identifier": "GEO:GSM1302279" }, { "identifier": "GTRD:EXP033400" } ], "species": { "name": "Rattus norvegicus" } }, "jaspar_id": "MA1494.1", "bed_filename": "macs/DAMO/EXP033400.H4-II-E_hepatocellular_carcinoma.HNF4A/EXP033400.H4-II-E_hepatocellular_carcinoma.HNF4A.MA1494.1.damo.bed", "fasta_filename": "macs/DAMO/EXP033400.H4-II-E_hepatocellular_carcinoma.HNF4A/EXP033400.H4-II-E_hepatocellular_carcinoma.HNF4A.MA1494.1.damo.fa", "profile_name": "HNF4A", "synonyms": [ "FRTS4", "HNF4", "HNF4a7", "HNF4a8", "HNF4a9", "HNF4alpha", "HNF4alpha10/11/12", "MODY", "MODY1", "NR2A1", "NR2A21", "TCF", "TCF-14", "TCF14", "hepatic nuclear factor 4 alpha", "hepatocyte nuclear factor 4 alpha", "hepatocyte nuclear factor 4-alpha", "nuclear receptor subfamily 2 group A member 1", "transcription factor 14", "transcription factor HNF-4" ] }, { "folder": { "folder": "EXP033401.H4-II-E_hepatocellular_carcinoma.HNF4A", "tf_name": "HNF4A", "samples": [ { "cell": { "title": "H4-II-E (hepatocellular carcinoma)" }, "biological_condition": "siRNA - Tcf7l2" } ], "references": [ { "identifier": "PUBMED:25414334" }, { "identifier": "GEO:GSM1302280" }, { "identifier": "GEO:GSE53862" }, { "identifier": "GTRD:EXP033401" } ], "species": { "name": "Rattus norvegicus" } }, "jaspar_id": "MA0114.4", "bed_filename": "macs/DAMO/EXP033401.H4-II-E_hepatocellular_carcinoma.HNF4A/EXP033401.H4-II-E_hepatocellular_carcinoma.HNF4A.MA0114.4.damo.bed", "fasta_filename": "macs/DAMO/EXP033401.H4-II-E_hepatocellular_carcinoma.HNF4A/EXP033401.H4-II-E_hepatocellular_carcinoma.HNF4A.MA0114.4.damo.fa", "profile_name": "HNF4A", "synonyms": [ "FRTS4", "HNF4", "HNF4a7", "HNF4a8", "HNF4a9", "HNF4alpha", "HNF4alpha10/11/12", "MODY", "MODY1", "NR2A1", "NR2A21", "TCF", "TCF-14", "TCF14", "hepatic nuclear factor 4 alpha", "hepatocyte nuclear factor 4 alpha", "hepatocyte nuclear factor 4-alpha", "nuclear receptor subfamily 2 group A member 1", "transcription factor 14", "transcription factor HNF-4" ] }, { "folder": { "folder": "EXP033401.H4-II-E_hepatocellular_carcinoma.HNF4A", "tf_name": "HNF4A", "samples": [ { "cell": { "title": "H4-II-E (hepatocellular carcinoma)" }, "biological_condition": "siRNA - Tcf7l2" } ], "references": [ { "identifier": "PUBMED:25414334" }, { "identifier": "GEO:GSM1302280" }, { "identifier": "GEO:GSE53862" }, { "identifier": "GTRD:EXP033401" } ], "species": { "name": "Rattus norvegicus" } }, "jaspar_id": "MA1494.1", "bed_filename": "macs/DAMO/EXP033401.H4-II-E_hepatocellular_carcinoma.HNF4A/EXP033401.H4-II-E_hepatocellular_carcinoma.HNF4A.MA1494.1.damo.bed", "fasta_filename": "macs/DAMO/EXP033401.H4-II-E_hepatocellular_carcinoma.HNF4A/EXP033401.H4-II-E_hepatocellular_carcinoma.HNF4A.MA1494.1.damo.fa", "profile_name": "HNF4A", "synonyms": [ "FRTS4", "HNF4", "HNF4a7", "HNF4a8", "HNF4a9", "HNF4alpha", "HNF4alpha10/11/12", "MODY", "MODY1", "NR2A1", "NR2A21", "TCF", "TCF-14", "TCF14", "hepatic nuclear factor 4 alpha", "hepatocyte nuclear factor 4 alpha", "hepatocyte nuclear factor 4-alpha", "nuclear receptor subfamily 2 group A member 1", "transcription factor 14", "transcription factor HNF-4" ] }, { "folder": { "folder": "EXP033402.H4-II-E_hepatocellular_carcinoma.TCF7L2", "tf_name": "TCF7L2", "samples": [ { "cell": { "title": "H4-II-E (hepatocellular carcinoma)" }, "biological_condition": "siRNA - Scrambled" } ], "references": [ { "identifier": "GEO:GSE53862" }, { "identifier": "PUBMED:25414334" }, { "identifier": "GEO:GSM1302276" }, { "identifier": "GEO:GSM1302275" }, { "identifier": "GTRD:EXP033402" } ], "species": { "name": "Rattus norvegicus" } }, "jaspar_id": "MA0523.1", "bed_filename": "macs/DAMO/EXP033402.H4-II-E_hepatocellular_carcinoma.TCF7L2/EXP033402.H4-II-E_hepatocellular_carcinoma.TCF7L2.MA0523.1.damo.bed", "fasta_filename": "macs/DAMO/EXP033402.H4-II-E_hepatocellular_carcinoma.TCF7L2/EXP033402.H4-II-E_hepatocellular_carcinoma.TCF7L2.MA0523.1.damo.fa", "profile_name": "TCF7L2", "synonyms": [ "HMG box transcription factor 4", "T-cell factor 4", "T-cell-specific transcription factor 4", "TCF-4", "TCF4", "hTCF-4", "transcription factor 7 like 2", "transcription factor 7-like 2", "transcription factor 7-like 2 (T-cell specific, HMG-box)" ] }, { "folder": { "folder": "EXP033403.H4-II-E_hepatocellular_carcinoma.TCF7L2", "tf_name": "TCF7L2", "samples": [ { "cell": { "title": "H4-II-E (hepatocellular carcinoma)" }, "biological_condition": "siRNA -Tcf7l2" } ], "references": [ { "identifier": "GEO:GSM1302277" }, { "identifier": "GEO:GSE53862" }, { "identifier": "PUBMED:25414334" }, { "identifier": "GEO:GSM1302278" }, { "identifier": "GTRD:EXP033403" } ], "species": { "name": "Rattus norvegicus" } }, "jaspar_id": "MA0523.1", "bed_filename": "macs/DAMO/EXP033403.H4-II-E_hepatocellular_carcinoma.TCF7L2/EXP033403.H4-II-E_hepatocellular_carcinoma.TCF7L2.MA0523.1.damo.bed", "fasta_filename": "macs/DAMO/EXP033403.H4-II-E_hepatocellular_carcinoma.TCF7L2/EXP033403.H4-II-E_hepatocellular_carcinoma.TCF7L2.MA0523.1.damo.fa", "profile_name": "TCF7L2", "synonyms": [ "HMG box transcription factor 4", "T-cell factor 4", "T-cell-specific transcription factor 4", "TCF-4", "TCF4", "hTCF-4", "transcription factor 7 like 2", "transcription factor 7-like 2", "transcription factor 7-like 2 (T-cell specific, HMG-box)" ] }, { "folder": { "folder": "EXP033674.GC_pituitary_cells.POU1F1", "tf_name": "POU1F1", "samples": [ { "cell": { "title": "GC pituitary cells" }, "biological_condition": "none" } ], "references": [ { "identifier": "GEO:GSE58009" }, { "identifier": "PUBMED:25119036" }, { "identifier": "GEO:GSM1399418" }, { "identifier": "GTRD:EXP033674" } ], "species": { "name": "Rattus norvegicus" } }, "jaspar_id": "MA0784.1", "bed_filename": "macs/DAMO/EXP033674.GC_pituitary_cells.POU1F1/EXP033674.GC_pituitary_cells.POU1F1.MA0784.1.damo.bed", "fasta_filename": "macs/DAMO/EXP033674.GC_pituitary_cells.POU1F1/EXP033674.GC_pituitary_cells.POU1F1.MA0784.1.damo.fa", "profile_name": "POU1F1", "synonyms": [ "CPHD1", "GHF-1", "PIT1", "POU class 1 homeobox 1", "POU domain, class 1, transcription factor 1", "POU1F1a", "Pit-1", "growth hormone factor 1", "pituitary transcript factor 1", "pituitary-specific positive transcription factor 1" ] }, { "folder": { "folder": "EXP033675.GC_pituitary_cells.POU1F1", "tf_name": "POU1F1", "samples": [ { "cell": { "title": "GC pituitary cells" }, "biological_condition": "none" } ], "references": [ { "identifier": "GEO:GSE58009" }, { "identifier": "PUBMED:25119036" }, { "identifier": "GEO:GSM1399419" }, { "identifier": "GTRD:EXP033675" } ], "species": { "name": "Rattus norvegicus" } }, "jaspar_id": "MA0784.1", "bed_filename": "macs/DAMO/EXP033675.GC_pituitary_cells.POU1F1/EXP033675.GC_pituitary_cells.POU1F1.MA0784.1.damo.bed", "fasta_filename": "macs/DAMO/EXP033675.GC_pituitary_cells.POU1F1/EXP033675.GC_pituitary_cells.POU1F1.MA0784.1.damo.fa", "profile_name": "POU1F1", "synonyms": [ "CPHD1", "GHF-1", "PIT1", "POU class 1 homeobox 1", "POU domain, class 1, transcription factor 1", "POU1F1a", "Pit-1", "growth hormone factor 1", "pituitary transcript factor 1", "pituitary-specific positive transcription factor 1" ] }, { "folder": { "folder": "EXP034467.spinal_cord.SOX10", "tf_name": "SOX10", "samples": [ { "cell": { "title": "spinal cord" }, "biological_condition": "" } ], "references": [ { "identifier": "GEO:GSM1577134" }, { "identifier": "GEO:GSE64703" }, { "identifier": "GEO:GSM1577133" }, { "identifier": "PUBMED:23966833" }, { "identifier": "PUBMED:25974668" }, { "identifier": "GTRD:EXP034467" } ], "species": { "name": "Rattus norvegicus" } }, "jaspar_id": "MA0442.2", "bed_filename": "macs/DAMO/EXP034467.spinal_cord.SOX10/EXP034467.spinal_cord.SOX10.MA0442.2.damo.bed", "fasta_filename": "macs/DAMO/EXP034467.spinal_cord.SOX10/EXP034467.spinal_cord.SOX10.MA0442.2.damo.fa", "profile_name": "SOX10", "synonyms": [ "DOM", "PCWH", "SOX-10", "SRY (sex determining region Y)-box 10", "SRY-box 10", "SRY-box transcription factor 10", "SRY-related HMG-box gene 10", "WS2E", "WS4", "WS4C", "dominant megacolon, mouse, human homolog of", "transcription factor SOX-10" ] }, { "folder": { "folder": "EXP034468.sciatic_nerve.SOX10", "tf_name": "SOX10", "samples": [ { "cell": { "title": "sciatic nerve" }, "biological_condition": "" } ], "references": [ { "identifier": "GEO:GSM1577136" }, { "identifier": "PUBMED:23966833" }, { "identifier": "PUBMED:25974668" }, { "identifier": "GEO:GSE64703" }, { "identifier": "GEO:GSM1577135" }, { "identifier": "GTRD:EXP034468" } ], "species": { "name": "Rattus norvegicus" } }, "jaspar_id": "MA0442.2", "bed_filename": "macs/DAMO/EXP034468.sciatic_nerve.SOX10/EXP034468.sciatic_nerve.SOX10.MA0442.2.damo.bed", "fasta_filename": "macs/DAMO/EXP034468.sciatic_nerve.SOX10/EXP034468.sciatic_nerve.SOX10.MA0442.2.damo.fa", "profile_name": "SOX10", "synonyms": [ "DOM", "PCWH", "SOX-10", "SRY (sex determining region Y)-box 10", "SRY-box 10", "SRY-box transcription factor 10", "SRY-related HMG-box gene 10", "WS2E", "WS4", "WS4C", "dominant megacolon, mouse, human homolog of", "transcription factor SOX-10" ] }, { "folder": { "folder": "EXP034509.oligodendrocyte_progenitors.TCF7L2", "tf_name": "TCF7L2", "samples": [ { "cell": { "title": "oligodendrocyte progenitors" }, "biological_condition": "T3 treated for 1 day" } ], "references": [ { "identifier": "GEO:GSM1587567" }, { "identifier": "GEO:GSE65119" }, { "identifier": "PUBMED:26955760" }, { "identifier": "GTRD:EXP034509" } ], "species": { "name": "Rattus norvegicus" } }, "jaspar_id": "MA0523.1", "bed_filename": "macs/DAMO/EXP034509.oligodendrocyte_progenitors.TCF7L2/EXP034509.oligodendrocyte_progenitors.TCF7L2.MA0523.1.damo.bed", "fasta_filename": "macs/DAMO/EXP034509.oligodendrocyte_progenitors.TCF7L2/EXP034509.oligodendrocyte_progenitors.TCF7L2.MA0523.1.damo.fa", "profile_name": "TCF7L2", "synonyms": [ "HMG box transcription factor 4", "T-cell factor 4", "T-cell-specific transcription factor 4", "TCF-4", "TCF4", "hTCF-4", "transcription factor 7 like 2", "transcription factor 7-like 2", "transcription factor 7-like 2 (T-cell specific, HMG-box)" ] } ] }