Specific Datasets List
This API provides an easy-to-use REST web interface to query/retrieve data
from the UniBind database. The API comes with a human browsable interface and
also a programmatic interface which return the results in different formats,
including
json, jsonp, yaml,
bed, and also api for a browsable interface.
GET /api/v1/specific/?collection=Robust&format=api&page=2&q=&species=10090&summary=true
{ "count": 4955, "next": "https://unibind.uio.no/api/v1/specific/?collection=Robust&format=api&page=3&q=&species=10090&summary=true", "previous": "https://unibind.uio.no/api/v1/specific/?collection=Robust&format=api&q=&species=10090&summary=true", "results": [ { "folder": { "folder": "ENCSR743ZJL.CH12_LX_Mouse_lymphoma.IRF4", "tf_name": "IRF4", "samples": [ { "cell": { "title": "CH12.LX (Mouse lymphoma)" }, "biological_condition": "" } ], "references": [ { "identifier": "ENCODE:ENCSR743ZJL" }, { "identifier": "GTRD:EXP039634" } ], "species": { "name": "Mus musculus" } }, "jaspar_id": "MA1419.1", "bed_filename": "macs/DAMO/ENCSR743ZJL.CH12_LX_Mouse_lymphoma.IRF4/ENCSR743ZJL.CH12_LX_Mouse_lymphoma.IRF4.MA1419.1.damo.bed", "fasta_filename": "macs/DAMO/ENCSR743ZJL.CH12_LX_Mouse_lymphoma.IRF4/ENCSR743ZJL.CH12_LX_Mouse_lymphoma.IRF4.MA1419.1.damo.fa", "profile_name": "IRF4", "synonyms": [ "LSIRF", "MUM1", "NF-EM5", "SHEP8", "interferon regulatory factor 4", "lymphocyte-specific interferon regulatory factor", "multiple myeloma oncogene 1" ] }, { "folder": { "folder": "ENCSR806JZK.CH12_LX_Mouse_lymphoma.MEF2A", "tf_name": "MEF2A", "samples": [ { "cell": { "title": "CH12.LX (Mouse lymphoma)" }, "biological_condition": "" } ], "references": [ { "identifier": "ENCODE:ENCSR806JZK" }, { "identifier": "GTRD:EXP039735" } ], "species": { "name": "Mus musculus" } }, "jaspar_id": "MA0052.4", "bed_filename": "macs/DAMO/ENCSR806JZK.CH12_LX_Mouse_lymphoma.MEF2A/ENCSR806JZK.CH12_LX_Mouse_lymphoma.MEF2A.MA0052.4.damo.bed", "fasta_filename": "macs/DAMO/ENCSR806JZK.CH12_LX_Mouse_lymphoma.MEF2A/ENCSR806JZK.CH12_LX_Mouse_lymphoma.MEF2A.MA0052.4.damo.fa", "profile_name": "MEF2A", "synonyms": [ "ADCAD1", "MADS box transcription enhancer factor 2, polypeptide A (myocyte enhancer factor 2A)", "RSRFC4", "RSRFC9", "mef2", "myocyte enhancer factor 2A", "myocyte-specific enhancer factor 2A", "serum response factor-like protein 1" ] }, { "folder": { "folder": "ENCSR867SDZ.MEL_cell_line.MEF2A", "tf_name": "MEF2A", "samples": [ { "cell": { "title": "MEL cell line" }, "biological_condition": "" } ], "references": [ { "identifier": "ENCODE:ENCSR867SDZ" }, { "identifier": "GTRD:EXP039837" } ], "species": { "name": "Mus musculus" } }, "jaspar_id": "MA0052.4", "bed_filename": "macs/DAMO/ENCSR867SDZ.MEL_cell_line.MEF2A/ENCSR867SDZ.MEL_cell_line.MEF2A.MA0052.4.damo.bed", "fasta_filename": "macs/DAMO/ENCSR867SDZ.MEL_cell_line.MEF2A/ENCSR867SDZ.MEL_cell_line.MEF2A.MA0052.4.damo.fa", "profile_name": "MEF2A", "synonyms": [ "ADCAD1", "MADS box transcription enhancer factor 2, polypeptide A (myocyte enhancer factor 2A)", "RSRFC4", "RSRFC9", "mef2", "myocyte enhancer factor 2A", "myocyte-specific enhancer factor 2A", "serum response factor-like protein 1" ] }, { "folder": { "folder": "ENCSR906QEK.CH12_LX_Mouse_lymphoma.TCF12", "tf_name": "TCF12", "samples": [ { "cell": { "title": "CH12.LX (Mouse lymphoma)" }, "biological_condition": "" } ], "references": [ { "identifier": "ENCODE:ENCSR906QEK" }, { "identifier": "GTRD:EXP039446" } ], "species": { "name": "Mus musculus" } }, "jaspar_id": "MA0521.1", "bed_filename": "macs/DAMO/ENCSR906QEK.CH12_LX_Mouse_lymphoma.TCF12/ENCSR906QEK.CH12_LX_Mouse_lymphoma.TCF12.MA0521.1.damo.bed", "fasta_filename": "macs/DAMO/ENCSR906QEK.CH12_LX_Mouse_lymphoma.TCF12/ENCSR906QEK.CH12_LX_Mouse_lymphoma.TCF12.MA0521.1.damo.fa", "profile_name": "Tcf12", "synonyms": [ "A130037E08Rik", "ALF1", "DNA-binding protein HTF4", "E-box-binding protein", "HEB", "HEBAlt", "HTF-4", "HTF4", "ME1", "REB", "TCF-12", "bHLHb20", "class A helix-loop-helix transcription factor ME1", "transcription factor 12", "transcription factor HTF-4" ] }, { "folder": { "folder": "ENCSR906QEK.CH12_LX_Mouse_lymphoma.TCF12", "tf_name": "TCF12", "samples": [ { "cell": { "title": "CH12.LX (Mouse lymphoma)" }, "biological_condition": "" } ], "references": [ { "identifier": "ENCODE:ENCSR906QEK" }, { "identifier": "GTRD:EXP039446" } ], "species": { "name": "Mus musculus" } }, "jaspar_id": "MA1648.1", "bed_filename": "macs/DAMO/ENCSR906QEK.CH12_LX_Mouse_lymphoma.TCF12/ENCSR906QEK.CH12_LX_Mouse_lymphoma.TCF12.MA1648.1.damo.bed", "fasta_filename": "macs/DAMO/ENCSR906QEK.CH12_LX_Mouse_lymphoma.TCF12/ENCSR906QEK.CH12_LX_Mouse_lymphoma.TCF12.MA1648.1.damo.fa", "profile_name": "TCF12", "synonyms": [ "CRS3", "DNA-binding protein HTF4", "E-box-binding protein", "HEB", "HH26", "HTF4", "HsT17266", "TCF-12", "bHLHb20", "class B basic helix-loop-helix protein 20", "helix-loop-helix transcription factor 4", "p64", "transcription factor 12", "transcription factor HTF-4" ] }, { "folder": { "folder": "ENCSR973SOG.CH12_LX_Mouse_lymphoma.USF1", "tf_name": "USF1", "samples": [ { "cell": { "title": "CH12.LX (Mouse lymphoma)" }, "biological_condition": "" } ], "references": [ { "identifier": "ENCODE:ENCSR973SOG" }, { "identifier": "GTRD:EXP039796" } ], "species": { "name": "Mus musculus" } }, "jaspar_id": "MA0093.3", "bed_filename": "macs/DAMO/ENCSR973SOG.CH12_LX_Mouse_lymphoma.USF1/ENCSR973SOG.CH12_LX_Mouse_lymphoma.USF1.MA0093.3.damo.bed", "fasta_filename": "macs/DAMO/ENCSR973SOG.CH12_LX_Mouse_lymphoma.USF1/ENCSR973SOG.CH12_LX_Mouse_lymphoma.USF1.MA0093.3.damo.fa", "profile_name": "USF1", "synonyms": [ "FCHL", "FCHL1", "HYPLIP1", "MLTF", "MLTFI", "UEF", "bHLHb11", "class B basic helix-loop-helix protein 11", "major late transcription factor 1", "upstream stimulatory factor 1", "upstream transcription factor 1" ] }, { "folder": { "folder": "ENCSR980YXJ.CH12_LX_Mouse_lymphoma.NRF1", "tf_name": "NRF1", "samples": [ { "cell": { "title": "CH12.LX (Mouse lymphoma)" }, "biological_condition": "" } ], "references": [ { "identifier": "ENCODE:ENCSR980YXJ" }, { "identifier": "GTRD:EXP039530" } ], "species": { "name": "Mus musculus" } }, "jaspar_id": "MA0506.1", "bed_filename": "macs/DAMO/ENCSR980YXJ.CH12_LX_Mouse_lymphoma.NRF1/ENCSR980YXJ.CH12_LX_Mouse_lymphoma.NRF1.MA0506.1.damo.bed", "fasta_filename": "macs/DAMO/ENCSR980YXJ.CH12_LX_Mouse_lymphoma.NRF1/ENCSR980YXJ.CH12_LX_Mouse_lymphoma.NRF1.MA0506.1.damo.fa", "profile_name": "NRF1", "synonyms": [ "ALPHA-PAL", "alpha palindromic-binding protein", "nuclear respiratory factor 1" ] }, { "folder": { "folder": "EXP000012.embryonic_fibroblasts.CTCF", "tf_name": "CTCF", "samples": [ { "cell": { "title": "embryonic fibroblasts" }, "biological_condition": "" } ], "references": [ { "identifier": "PUBMED:20720539" }, { "identifier": "GEO:GSE22562" }, { "identifier": "GEO:GSM560352" }, { "identifier": "GEO:GSM560351" }, { "identifier": "GTRD:EXP000012" } ], "species": { "name": "Mus musculus" } }, "jaspar_id": "MA0139.1", "bed_filename": "macs/DAMO/EXP000012.embryonic_fibroblasts.CTCF/EXP000012.embryonic_fibroblasts.CTCF.MA0139.1.damo.bed", "fasta_filename": "macs/DAMO/EXP000012.embryonic_fibroblasts.CTCF/EXP000012.embryonic_fibroblasts.CTCF.MA0139.1.damo.fa", "profile_name": "CTCF", "synonyms": [ "11 zinc finger transcriptional repressor", "11-zinc finger protein", "CCCTC-binding factor", "CCCTC-binding factor (zinc finger protein)", "CFAP108", "CTCFL paralog", "FAP108", "MRD21", "transcriptional repressor CTCF" ] }, { "folder": { "folder": "EXP000018.embryonic_stem_cells.POU5F1", "tf_name": "POU5F1", "samples": [ { "cell": { "title": "embryonic stem cells" }, "biological_condition": "" } ], "references": [ { "identifier": "GEO:GSE11724" }, { "identifier": "PUBMED:18692474" }, { "identifier": "GEO:GSM307137" }, { "identifier": "GTRD:EXP000018" } ], "species": { "name": "Mus musculus" } }, "jaspar_id": "MA0142.1", "bed_filename": "macs/DAMO/EXP000018.embryonic_stem_cells.POU5F1/EXP000018.embryonic_stem_cells.POU5F1.MA0142.1.damo.bed", "fasta_filename": "macs/DAMO/EXP000018.embryonic_stem_cells.POU5F1/EXP000018.embryonic_stem_cells.POU5F1.MA0142.1.damo.fa", "profile_name": "Pou5f1::Sox2", "synonyms": [ "NF-A3", "Oct-3", "Oct-3/4", "Oct-4", "Oct3", "Oct3/4", "Oct4", "Otf-3", "Otf-4", "Otf3", "Otf3-rs7", "Otf3g", "Otf4", "POU domain class 5 transcription factor 1 transcript variant 2 oct4b'", "POU domain class 5 transcription factor 1 transcript variant 3 oct4b", "POU domain, class 5, transcription factor 1", "SRY (sex determining region Y)-box 2", "SRY-box containing gene 2", "Sox-2", "lcc", "octamer-binding protein 3", "octamer-binding protein 4", "octamer-binding transcription factor 3", "octamer-binding transcription factor 4 alternative", "transcription factor SOX-2", "ysb" ] }, { "folder": { "folder": "EXP000018.embryonic_stem_cells.POU5F1", "tf_name": "POU5F1", "samples": [ { "cell": { "title": "embryonic stem cells" }, "biological_condition": "" } ], "references": [ { "identifier": "GEO:GSE11724" }, { "identifier": "PUBMED:18692474" }, { "identifier": "GEO:GSM307137" }, { "identifier": "GTRD:EXP000018" } ], "species": { "name": "Mus musculus" } }, "jaspar_id": "MA1115.1", "bed_filename": "macs/DAMO/EXP000018.embryonic_stem_cells.POU5F1/EXP000018.embryonic_stem_cells.POU5F1.MA1115.1.damo.bed", "fasta_filename": "macs/DAMO/EXP000018.embryonic_stem_cells.POU5F1/EXP000018.embryonic_stem_cells.POU5F1.MA1115.1.damo.fa", "profile_name": "POU5F1", "synonyms": [ "OCT3", "OCT4", "OTF-3", "OTF3", "OTF4", "Oct-3", "Oct-4", "POU class 5 homeobox 1", "POU domain transcription factor OCT4", "POU domain, class 5, transcription factor 1", "POU-type homeodomain-containing DNA-binding protein", "octamer-binding protein 3", "octamer-binding protein 4", "octamer-binding transcription factor 3" ] } ] }