Datasets List
This API provides an easy-to-use REST web interface to query/retrieve data
from the UniBind database. The API comes with a human browsable interface and
also a programmatic interface which return the results in different formats,
including
json, jsonp, yaml,
bed, and also api for a browsable interface.
GET /api/v1/datasets/?format=api&page=4&q=ENCODE&summary=true
{ "count": 1358, "next": "https://unibind.uio.no/api/v1/datasets/?format=api&page=5&q=ENCODE&summary=true", "previous": "https://unibind.uio.no/api/v1/datasets/?format=api&page=3&q=ENCODE&summary=true", "results": [ { "folder": "ENCSR028UIU.K562_myelogenous_leukemia.ATF3", "tf_name": "ATF3", "samples": [ { "cell": { "title": "K562 (myelogenous leukemia)" }, "biological_condition": "" } ], "references": [ { "identifier": "ENCODE:ENCSR028UIU" }, { "identifier": "GTRD:EXP040300" } ], "species": { "name": "Homo sapiens" }, "datasets": [ { "jaspar_id": "MA0605.2", "bed_filename": "macs/DAMO/ENCSR028UIU.K562_myelogenous_leukemia.ATF3/ENCSR028UIU.K562_myelogenous_leukemia.ATF3.MA0605.2.damo.bed", "fasta_filename": "macs/DAMO/ENCSR028UIU.K562_myelogenous_leukemia.ATF3/ENCSR028UIU.K562_myelogenous_leukemia.ATF3.MA0605.2.damo.fa", "profile_name": "ATF3", "synonyms": [ "activating transcription factor 3", "cAMP-dependent transcription factor ATF-3", "cyclic AMP-dependent transcription factor ATF-3" ] } ] }, { "folder": "EXP039361.K562_myelogenous_leukemia.ATF3", "tf_name": "ATF3", "samples": [ { "cell": { "title": "K562 (myelogenous leukemia)" }, "biological_condition": "" } ], "references": [ { "identifier": "GEO:GSE91932" }, { "identifier": "ENCODE:ENCSR632DCH" }, { "identifier": "GTRD:EXP039361" } ], "species": { "name": "Homo sapiens" }, "datasets": [ { "jaspar_id": "MA0605.2", "bed_filename": "macs/DAMO/EXP039361.K562_myelogenous_leukemia.ATF3/EXP039361.K562_myelogenous_leukemia.ATF3.MA0605.2.damo.bed", "fasta_filename": "macs/DAMO/EXP039361.K562_myelogenous_leukemia.ATF3/EXP039361.K562_myelogenous_leukemia.ATF3.MA0605.2.damo.fa", "profile_name": "ATF3", "synonyms": [ "activating transcription factor 3", "cAMP-dependent transcription factor ATF-3", "cyclic AMP-dependent transcription factor ATF-3" ] } ] }, { "folder": "ENCSR145TSJ.K562_myelogenous_leukemia.ATF4", "tf_name": "ATF4", "samples": [ { "cell": { "title": "K562 (myelogenous leukemia)" }, "biological_condition": "" } ], "references": [ { "identifier": "ENCODE:ENCSR145TSJ" }, { "identifier": "GTRD:EXP040245" } ], "species": { "name": "Homo sapiens" }, "datasets": [ { "jaspar_id": "MA0833.2", "bed_filename": "macs/DAMO/ENCSR145TSJ.K562_myelogenous_leukemia.ATF4/ENCSR145TSJ.K562_myelogenous_leukemia.ATF4.MA0833.2.damo.bed", "fasta_filename": "macs/DAMO/ENCSR145TSJ.K562_myelogenous_leukemia.ATF4/ENCSR145TSJ.K562_myelogenous_leukemia.ATF4.MA0833.2.damo.fa", "profile_name": "ATF4", "synonyms": [ "CREB-2", "CREB2", "DNA-binding protein TAXREB67", "TAXREB67", "TXREB", "activating transcription factor 4", "cAMP response element-binding protein 2", "cAMP-dependent transcription factor ATF-4", "cAMP-responsive element-binding protein 2", "cyclic AMP-dependent transcription factor ATF-4", "cyclic AMP-responsive element-binding protein 2", "tax-responsive enhancer element B67", "tax-responsive enhancer element-binding protein 67" ] } ] }, { "folder": "ENCSR014YCR.GM12878_female_B-cells_lymphoblastoid_cell_line.ATF7", "tf_name": "ATF7", "samples": [ { "cell": { "title": "GM12878 (female B-cells lymphoblastoid cell line)" }, "biological_condition": "" } ], "references": [ { "identifier": "ENCODE:ENCSR014YCR" }, { "identifier": "GTRD:EXP039442" } ], "species": { "name": "Homo sapiens" }, "datasets": [ { "jaspar_id": "MA0834.1", "bed_filename": "macs/DAMO/ENCSR014YCR.GM12878_female_B-cells_lymphoblastoid_cell_line.ATF7/ENCSR014YCR.GM12878_female_B-cells_lymphoblastoid_cell_line.ATF7.MA0834.1.damo.bed", "fasta_filename": "macs/DAMO/ENCSR014YCR.GM12878_female_B-cells_lymphoblastoid_cell_line.ATF7/ENCSR014YCR.GM12878_female_B-cells_lymphoblastoid_cell_line.ATF7.MA0834.1.damo.fa", "profile_name": "ATF7", "synonyms": [ "ATFA", "activating transcription factor 7", "cyclic AMP-dependent transcription factor ATF-7", "transcription factor ATF-A" ] } ] }, { "folder": "ENCSR866QPZ.MCF7_Invasive_ductal_breast_carcinoma.ATF7", "tf_name": "ATF7", "samples": [ { "cell": { "title": "MCF7 (Invasive ductal breast carcinoma)" }, "biological_condition": "" } ], "references": [ { "identifier": "ENCODE:ENCSR866QPZ" }, { "identifier": "GTRD:EXP039990" } ], "species": { "name": "Homo sapiens" }, "datasets": [ { "jaspar_id": "MA0834.1", "bed_filename": "macs/DAMO/ENCSR866QPZ.MCF7_Invasive_ductal_breast_carcinoma.ATF7/ENCSR866QPZ.MCF7_Invasive_ductal_breast_carcinoma.ATF7.MA0834.1.damo.bed", "fasta_filename": "macs/DAMO/ENCSR866QPZ.MCF7_Invasive_ductal_breast_carcinoma.ATF7/ENCSR866QPZ.MCF7_Invasive_ductal_breast_carcinoma.ATF7.MA0834.1.damo.fa", "profile_name": "ATF7", "synonyms": [ "ATFA", "activating transcription factor 7", "cyclic AMP-dependent transcription factor ATF-7", "transcription factor ATF-A" ] } ] }, { "folder": "ENCSR545FXC.HepG2_hepatoblastoma.ATF7", "tf_name": "ATF7", "samples": [ { "cell": { "title": "HepG2 (hepatoblastoma)" }, "biological_condition": "" } ], "references": [ { "identifier": "ENCODE:ENCSR545FXC" }, { "identifier": "GTRD:EXP040022" } ], "species": { "name": "Homo sapiens" }, "datasets": [ { "jaspar_id": "MA0834.1", "bed_filename": "macs/DAMO/ENCSR545FXC.HepG2_hepatoblastoma.ATF7/ENCSR545FXC.HepG2_hepatoblastoma.ATF7.MA0834.1.damo.bed", "fasta_filename": "macs/DAMO/ENCSR545FXC.HepG2_hepatoblastoma.ATF7/ENCSR545FXC.HepG2_hepatoblastoma.ATF7.MA0834.1.damo.fa", "profile_name": "ATF7", "synonyms": [ "ATFA", "activating transcription factor 7", "cyclic AMP-dependent transcription factor ATF-7", "transcription factor ATF-A" ] } ] }, { "folder": "ENCSR795MVJ.whole_organism_development_stage_embryonic.B-H2", "tf_name": "B-H2", "samples": [ { "cell": { "title": "whole organism (development stage: embryonic)" }, "biological_condition": "strain: B-H2-GFP, genotype: y[1] w[*]; Pbac{y[+mDint2] w[+mC]=B-H2-GFP.FPTB}VK00033, sex:mixed" } ], "references": [ { "identifier": "ENCODE:ENCSR795MVJ" }, { "identifier": "GTRD:EXP044176" } ], "species": { "name": "Drosophila melanogaster" }, "datasets": [ { "jaspar_id": "MA0169.1", "bed_filename": "macs/DAMO/ENCSR795MVJ.whole_organism_development_stage_embryonic.B-H2/ENCSR795MVJ.whole_organism_development_stage_embryonic.B-H2.MA0169.1.damo.bed", "fasta_filename": "macs/DAMO/ENCSR795MVJ.whole_organism_development_stage_embryonic.B-H2/ENCSR795MVJ.whole_organism_development_stage_embryonic.B-H2.MA0169.1.damo.fa", "profile_name": "B-H2", "synonyms": [ "B", "B-H2-PA", "B-H2-PB", "BH2", "Bar", "Bar-H2", "BarH", "BarH2", "Barh2", "CG5488", "CG5488-PA", "CG5488-PB", "Dmel\\\\CG5488", "Dmel_CG5488", "bar-h2" ] } ] }, { "folder": "ENCSR000EBQ.WA01_H1_human_embryonic_stem_cells.BACH1", "tf_name": "BACH1", "samples": [ { "cell": { "title": "WA01 (H1, human embryonic stem cells)" }, "biological_condition": "" } ], "references": [ { "identifier": "ENCODE:ENCSR000EBQ" }, { "identifier": "GTRD:EXP010596" } ], "species": { "name": "Homo sapiens" }, "datasets": [ { "jaspar_id": "MA0591.1", "bed_filename": "macs/DAMO/ENCSR000EBQ.WA01_H1_human_embryonic_stem_cells.BACH1/ENCSR000EBQ.WA01_H1_human_embryonic_stem_cells.BACH1.MA0591.1.damo.bed", "fasta_filename": "macs/DAMO/ENCSR000EBQ.WA01_H1_human_embryonic_stem_cells.BACH1/ENCSR000EBQ.WA01_H1_human_embryonic_stem_cells.BACH1.MA0591.1.damo.fa", "profile_name": "Bach1::Mafk", "synonyms": [ "6230421P05Rik", "AI323795", "AW061068", "BTB and CNC homolog 1", "BTB and CNC homology 1 transcription factor", "BTB and CNC homology 1, basic leucine zipper transcription factor 1", "NF-E2", "Nfe2u", "erythroid transcription factor NF-E2 p18 subunit", "nuclear factor, erythroid derived 2, ubiquitous", "p18 NF-E2", "transcription factor MafK", "transcription regulator protein BACH1", "v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian)" ] } ] }, { "folder": "ENCSR000EGD.K562_myelogenous_leukemia.BACH1", "tf_name": "BACH1", "samples": [ { "cell": { "title": "K562 (myelogenous leukemia)" }, "biological_condition": "" } ], "references": [ { "identifier": "ENCODE:ENCSR000EGD" }, { "identifier": "GTRD:EXP010085" } ], "species": { "name": "Homo sapiens" }, "datasets": [ { "jaspar_id": "MA0591.1", "bed_filename": "macs/DAMO/ENCSR000EGD.K562_myelogenous_leukemia.BACH1/ENCSR000EGD.K562_myelogenous_leukemia.BACH1.MA0591.1.damo.bed", "fasta_filename": "macs/DAMO/ENCSR000EGD.K562_myelogenous_leukemia.BACH1/ENCSR000EGD.K562_myelogenous_leukemia.BACH1.MA0591.1.damo.fa", "profile_name": "Bach1::Mafk", "synonyms": [ "6230421P05Rik", "AI323795", "AW061068", "BTB and CNC homolog 1", "BTB and CNC homology 1 transcription factor", "BTB and CNC homology 1, basic leucine zipper transcription factor 1", "NF-E2", "Nfe2u", "erythroid transcription factor NF-E2 p18 subunit", "nuclear factor, erythroid derived 2, ubiquitous", "p18 NF-E2", "transcription factor MafK", "transcription regulator protein BACH1", "v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian)" ] } ] }, { "folder": "ENCSR043EHG.A549_lung_carcinoma.BACH1", "tf_name": "BACH1", "samples": [ { "cell": { "title": "A549 (lung carcinoma)" }, "biological_condition": "" } ], "references": [ { "identifier": "ENCODE:ENCSR043EHG" } ], "species": { "name": "Homo sapiens" }, "datasets": [ { "jaspar_id": "MA0591.1", "bed_filename": "macs/DAMO/ENCSR043EHG.A549_lung_carcinoma.BACH1/ENCSR043EHG.A549_lung_carcinoma.BACH1.MA0591.1.damo.bed", "fasta_filename": "macs/DAMO/ENCSR043EHG.A549_lung_carcinoma.BACH1/ENCSR043EHG.A549_lung_carcinoma.BACH1.MA0591.1.damo.fa", "profile_name": "Bach1::Mafk", "synonyms": [ "6230421P05Rik", "AI323795", "AW061068", "BTB and CNC homolog 1", "BTB and CNC homology 1 transcription factor", "BTB and CNC homology 1, basic leucine zipper transcription factor 1", "NF-E2", "Nfe2u", "erythroid transcription factor NF-E2 p18 subunit", "nuclear factor, erythroid derived 2, ubiquitous", "p18 NF-E2", "transcription factor MafK", "transcription regulator protein BACH1", "v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian)" ] } ] } ] }