Datasets List
This API provides an easy-to-use REST web interface to query/retrieve data
from the UniBind database. The API comes with a human browsable interface and
also a programmatic interface which return the results in different formats,
including
json, jsonp, yaml,
bed, and also api for a browsable interface.
GET /api/v1/datasets/?format=api&page=3&q=SRF&summary=true
{ "count": 96, "next": "https://unibind.uio.no/api/v1/datasets/?format=api&page=4&q=SRF&summary=true", "previous": "https://unibind.uio.no/api/v1/datasets/?format=api&page=2&q=SRF&summary=true", "results": [ { "folder": "EXP030895.HL-1_cardiac_muscle_cells.MEF2A", "tf_name": "MEF2A", "samples": [ { "cell": { "title": "HL-1 (cardiac muscle cells)" }, "biological_condition": "" } ], "references": [ { "identifier": "GEO:GSM558905" }, { "identifier": "GEO:GSE21529" }, { "identifier": "PUBMED:21415370" }, { "identifier": "GTRD:EXP030895" } ], "species": { "name": "Mus musculus" }, "datasets": [ { "jaspar_id": "MA0052.4", "bed_filename": "macs/DAMO/EXP030895.HL-1_cardiac_muscle_cells.MEF2A/EXP030895.HL-1_cardiac_muscle_cells.MEF2A.MA0052.4.damo.bed", "fasta_filename": "macs/DAMO/EXP030895.HL-1_cardiac_muscle_cells.MEF2A/EXP030895.HL-1_cardiac_muscle_cells.MEF2A.MA0052.4.damo.fa", "profile_name": "MEF2A", "synonyms": [ "ADCAD1", "MADS box transcription enhancer factor 2, polypeptide A (myocyte enhancer factor 2A)", "RSRFC4", "RSRFC9", "mef2", "myocyte enhancer factor 2A", "myocyte-specific enhancer factor 2A", "serum response factor-like protein 1" ] } ] }, { "folder": "EXP048297.germinal_center_B-cells.MEF2B", "tf_name": "MEF2B", "samples": [ { "cell": { "title": "germinal center B-cells" }, "biological_condition": "Treatment: tonsil " } ], "references": [ { "identifier": "GEO:GSE110682" }, { "identifier": "GEO:GSM3011725" }, { "identifier": "GTRD:EXP048297" } ], "species": { "name": "Homo sapiens" }, "datasets": [ { "jaspar_id": "MA0660.1", "bed_filename": "macs/DAMO/EXP048297.germinal_center_B-cells.MEF2B/EXP048297.germinal_center_B-cells.MEF2B.MA0660.1.damo.bed", "fasta_filename": "macs/DAMO/EXP048297.germinal_center_B-cells.MEF2B/EXP048297.germinal_center_B-cells.MEF2B.MA0660.1.damo.fa", "profile_name": "MEF2B", "synonyms": [ "BORCS8-MEF2B readthrough", "LOC729991-MEF2B", "LOC729991-MEF2B readthrough", "MADS box transcription enhancer factor 2, polypeptide B (myocyte enhancer factor 2B)", "MEF2B", "MEF2BNB-MEF2B", "MEF2BNB-MEF2B readthrough", "RSRFR2", "RSRFR2", "myocyte enhancer factor 2B", "myocyte enhancer factor 2B", "myocyte-specific enhancer factor 2B", "myocyte-specific enhancer factor 2B", "serum response factor-like protein 2", "serum response factor-like protein 2" ] } ] }, { "folder": "EXP048298.germinal_center_B-cells.MEF2B", "tf_name": "MEF2B", "samples": [ { "cell": { "title": "germinal center B-cells" }, "biological_condition": "Treatment: tonsil " } ], "references": [ { "identifier": "GEO:GSM3011727" }, { "identifier": "GEO:GSE110682" }, { "identifier": "GTRD:EXP048298" } ], "species": { "name": "Homo sapiens" }, "datasets": [ { "jaspar_id": "MA0660.1", "bed_filename": "macs/DAMO/EXP048298.germinal_center_B-cells.MEF2B/EXP048298.germinal_center_B-cells.MEF2B.MA0660.1.damo.bed", "fasta_filename": "macs/DAMO/EXP048298.germinal_center_B-cells.MEF2B/EXP048298.germinal_center_B-cells.MEF2B.MA0660.1.damo.fa", "profile_name": "MEF2B", "synonyms": [ "BORCS8-MEF2B readthrough", "LOC729991-MEF2B", "LOC729991-MEF2B readthrough", "MADS box transcription enhancer factor 2, polypeptide B (myocyte enhancer factor 2B)", "MEF2B", "MEF2BNB-MEF2B", "MEF2BNB-MEF2B readthrough", "RSRFR2", "RSRFR2", "myocyte enhancer factor 2B", "myocyte enhancer factor 2B", "myocyte-specific enhancer factor 2B", "myocyte-specific enhancer factor 2B", "serum response factor-like protein 2", "serum response factor-like protein 2" ] } ] }, { "folder": "EXP048299.SU-DHL-10_diffuse_large_B-cell_lymphoma.MEF2B", "tf_name": "MEF2B", "samples": [ { "cell": { "title": "SU-DHL-10 (diffuse large B-cell lymphoma)" }, "biological_condition": "Genotype: wiltype MEF2B" } ], "references": [ { "identifier": "GEO:GSM3011729" }, { "identifier": "GEO:GSE110682" }, { "identifier": "GTRD:EXP048299" } ], "species": { "name": "Homo sapiens" }, "datasets": [ { "jaspar_id": "MA0660.1", "bed_filename": "macs/DAMO/EXP048299.SU-DHL-10_diffuse_large_B-cell_lymphoma.MEF2B/EXP048299.SU-DHL-10_diffuse_large_B-cell_lymphoma.MEF2B.MA0660.1.damo.bed", "fasta_filename": "macs/DAMO/EXP048299.SU-DHL-10_diffuse_large_B-cell_lymphoma.MEF2B/EXP048299.SU-DHL-10_diffuse_large_B-cell_lymphoma.MEF2B.MA0660.1.damo.fa", "profile_name": "MEF2B", "synonyms": [ "BORCS8-MEF2B readthrough", "LOC729991-MEF2B", "LOC729991-MEF2B readthrough", "MADS box transcription enhancer factor 2, polypeptide B (myocyte enhancer factor 2B)", "MEF2B", "MEF2BNB-MEF2B", "MEF2BNB-MEF2B readthrough", "RSRFR2", "RSRFR2", "myocyte enhancer factor 2B", "myocyte enhancer factor 2B", "myocyte-specific enhancer factor 2B", "myocyte-specific enhancer factor 2B", "serum response factor-like protein 2", "serum response factor-like protein 2" ] } ] }, { "folder": "EXP048300.SU-DHL-10_diffuse_large_B-cell_lymphoma.MEF2B", "tf_name": "MEF2B", "samples": [ { "cell": { "title": "SU-DHL-10 (diffuse large B-cell lymphoma)" }, "biological_condition": "Genotype: wiltype MEF2B with Flag and HA" } ], "references": [ { "identifier": "GEO:GSE110682" }, { "identifier": "GEO:GSM3011730" }, { "identifier": "GTRD:EXP048300" } ], "species": { "name": "Homo sapiens" }, "datasets": [ { "jaspar_id": "MA0660.1", "bed_filename": "macs/DAMO/EXP048300.SU-DHL-10_diffuse_large_B-cell_lymphoma.MEF2B/EXP048300.SU-DHL-10_diffuse_large_B-cell_lymphoma.MEF2B.MA0660.1.damo.bed", "fasta_filename": "macs/DAMO/EXP048300.SU-DHL-10_diffuse_large_B-cell_lymphoma.MEF2B/EXP048300.SU-DHL-10_diffuse_large_B-cell_lymphoma.MEF2B.MA0660.1.damo.fa", "profile_name": "MEF2B", "synonyms": [ "BORCS8-MEF2B readthrough", "LOC729991-MEF2B", "LOC729991-MEF2B readthrough", "MADS box transcription enhancer factor 2, polypeptide B (myocyte enhancer factor 2B)", "MEF2B", "MEF2BNB-MEF2B", "MEF2BNB-MEF2B readthrough", "RSRFR2", "RSRFR2", "myocyte enhancer factor 2B", "myocyte enhancer factor 2B", "myocyte-specific enhancer factor 2B", "myocyte-specific enhancer factor 2B", "serum response factor-like protein 2", "serum response factor-like protein 2" ] } ] }, { "folder": "EXP048301.SU-DHL-10_diffuse_large_B-cell_lymphoma.MEF2B", "tf_name": "MEF2B", "samples": [ { "cell": { "title": "SU-DHL-10 (diffuse large B-cell lymphoma)" }, "biological_condition": "Genotype: MEF2B- D83V mutant" } ], "references": [ { "identifier": "GEO:GSE110682" }, { "identifier": "GEO:GSM3011732" }, { "identifier": "GTRD:EXP048301" } ], "species": { "name": "Homo sapiens" }, "datasets": [ { "jaspar_id": "MA0660.1", "bed_filename": "macs/DAMO/EXP048301.SU-DHL-10_diffuse_large_B-cell_lymphoma.MEF2B/EXP048301.SU-DHL-10_diffuse_large_B-cell_lymphoma.MEF2B.MA0660.1.damo.bed", "fasta_filename": "macs/DAMO/EXP048301.SU-DHL-10_diffuse_large_B-cell_lymphoma.MEF2B/EXP048301.SU-DHL-10_diffuse_large_B-cell_lymphoma.MEF2B.MA0660.1.damo.fa", "profile_name": "MEF2B", "synonyms": [ "BORCS8-MEF2B readthrough", "LOC729991-MEF2B", "LOC729991-MEF2B readthrough", "MADS box transcription enhancer factor 2, polypeptide B (myocyte enhancer factor 2B)", "MEF2B", "MEF2BNB-MEF2B", "MEF2BNB-MEF2B readthrough", "RSRFR2", "RSRFR2", "myocyte enhancer factor 2B", "myocyte enhancer factor 2B", "myocyte-specific enhancer factor 2B", "myocyte-specific enhancer factor 2B", "serum response factor-like protein 2", "serum response factor-like protein 2" ] } ] }, { "folder": "EXP048302.SU-DHL-10_diffuse_large_B-cell_lymphoma.MEF2B", "tf_name": "MEF2B", "samples": [ { "cell": { "title": "SU-DHL-10 (diffuse large B-cell lymphoma)" }, "biological_condition": "Genotype: MEF2B- D83V mutant with flag and HA" } ], "references": [ { "identifier": "GEO:GSM3011733" }, { "identifier": "GEO:GSE110682" }, { "identifier": "GTRD:EXP048302" } ], "species": { "name": "Homo sapiens" }, "datasets": [ { "jaspar_id": "MA0660.1", "bed_filename": "macs/DAMO/EXP048302.SU-DHL-10_diffuse_large_B-cell_lymphoma.MEF2B/EXP048302.SU-DHL-10_diffuse_large_B-cell_lymphoma.MEF2B.MA0660.1.damo.bed", "fasta_filename": "macs/DAMO/EXP048302.SU-DHL-10_diffuse_large_B-cell_lymphoma.MEF2B/EXP048302.SU-DHL-10_diffuse_large_B-cell_lymphoma.MEF2B.MA0660.1.damo.fa", "profile_name": "MEF2B", "synonyms": [ "BORCS8-MEF2B readthrough", "LOC729991-MEF2B", "LOC729991-MEF2B readthrough", "MADS box transcription enhancer factor 2, polypeptide B (myocyte enhancer factor 2B)", "MEF2B", "MEF2BNB-MEF2B", "MEF2BNB-MEF2B readthrough", "RSRFR2", "RSRFR2", "myocyte enhancer factor 2B", "myocyte enhancer factor 2B", "myocyte-specific enhancer factor 2B", "myocyte-specific enhancer factor 2B", "serum response factor-like protein 2", "serum response factor-like protein 2" ] } ] }, { "folder": "EXP055127.HEK293-A.MEF2B", "tf_name": "MEF2B", "samples": [ { "cell": { "title": "HEK293-A" }, "biological_condition": "Genotype: wildtype MEF2B-V5;" } ], "references": [ { "identifier": "GEO:GSE67450" }, { "identifier": "GEO:GSM1647184" }, { "identifier": "PUBMED:26245647" }, { "identifier": "GTRD:EXP055127" } ], "species": { "name": "Homo sapiens" }, "datasets": [ { "jaspar_id": "MA0660.1", "bed_filename": "macs/DAMO/EXP055127.HEK293-A.MEF2B/EXP055127.HEK293-A.MEF2B.MA0660.1.damo.bed", "fasta_filename": "macs/DAMO/EXP055127.HEK293-A.MEF2B/EXP055127.HEK293-A.MEF2B.MA0660.1.damo.fa", "profile_name": "MEF2B", "synonyms": [ "BORCS8-MEF2B readthrough", "LOC729991-MEF2B", "LOC729991-MEF2B readthrough", "MADS box transcription enhancer factor 2, polypeptide B (myocyte enhancer factor 2B)", "MEF2B", "MEF2BNB-MEF2B", "MEF2BNB-MEF2B readthrough", "RSRFR2", "RSRFR2", "myocyte enhancer factor 2B", "myocyte enhancer factor 2B", "myocyte-specific enhancer factor 2B", "myocyte-specific enhancer factor 2B", "serum response factor-like protein 2", "serum response factor-like protein 2" ] } ] }, { "folder": "EXP055128.HEK293-A.MEF2B", "tf_name": "MEF2B", "samples": [ { "cell": { "title": "HEK293-A" }, "biological_condition": "Genotype: wildtype MEF2B-V5;" } ], "references": [ { "identifier": "GEO:GSE67450" }, { "identifier": "GEO:GSM1647185" }, { "identifier": "PUBMED:26245647" }, { "identifier": "GTRD:EXP055128" } ], "species": { "name": "Homo sapiens" }, "datasets": [ { "jaspar_id": "MA0660.1", "bed_filename": "macs/DAMO/EXP055128.HEK293-A.MEF2B/EXP055128.HEK293-A.MEF2B.MA0660.1.damo.bed", "fasta_filename": "macs/DAMO/EXP055128.HEK293-A.MEF2B/EXP055128.HEK293-A.MEF2B.MA0660.1.damo.fa", "profile_name": "MEF2B", "synonyms": [ "BORCS8-MEF2B readthrough", "LOC729991-MEF2B", "LOC729991-MEF2B readthrough", "MADS box transcription enhancer factor 2, polypeptide B (myocyte enhancer factor 2B)", "MEF2B", "MEF2BNB-MEF2B", "MEF2BNB-MEF2B readthrough", "RSRFR2", "RSRFR2", "myocyte enhancer factor 2B", "myocyte enhancer factor 2B", "myocyte-specific enhancer factor 2B", "myocyte-specific enhancer factor 2B", "serum response factor-like protein 2", "serum response factor-like protein 2" ] } ] }, { "folder": "EXP055129.HEK293-A.MEF2B", "tf_name": "MEF2B", "samples": [ { "cell": { "title": "HEK293-A" }, "biological_condition": "Genotype: K4E-MEF2B-V5;" } ], "references": [ { "identifier": "GEO:GSM1647186" }, { "identifier": "GEO:GSE67450" }, { "identifier": "PUBMED:26245647" }, { "identifier": "GTRD:EXP055129" } ], "species": { "name": "Homo sapiens" }, "datasets": [ { "jaspar_id": "MA0660.1", "bed_filename": "macs/DAMO/EXP055129.HEK293-A.MEF2B/EXP055129.HEK293-A.MEF2B.MA0660.1.damo.bed", "fasta_filename": "macs/DAMO/EXP055129.HEK293-A.MEF2B/EXP055129.HEK293-A.MEF2B.MA0660.1.damo.fa", "profile_name": "MEF2B", "synonyms": [ "BORCS8-MEF2B readthrough", "LOC729991-MEF2B", "LOC729991-MEF2B readthrough", "MADS box transcription enhancer factor 2, polypeptide B (myocyte enhancer factor 2B)", "MEF2B", "MEF2BNB-MEF2B", "MEF2BNB-MEF2B readthrough", "RSRFR2", "RSRFR2", "myocyte enhancer factor 2B", "myocyte enhancer factor 2B", "myocyte-specific enhancer factor 2B", "myocyte-specific enhancer factor 2B", "serum response factor-like protein 2", "serum response factor-like protein 2" ] } ] } ] }