Datasets List
This API provides an easy-to-use REST web interface to query/retrieve data
from the UniBind database. The API comes with a human browsable interface and
also a programmatic interface which return the results in different formats,
including
json, jsonp, yaml,
bed, and also api for a browsable interface.
GET /api/v1/datasets/?format=api&page=3&q=K562&summary=true
{ "count": 242, "next": "https://unibind.uio.no/api/v1/datasets/?format=api&page=4&q=K562&summary=true", "previous": "https://unibind.uio.no/api/v1/datasets/?format=api&page=2&q=K562&summary=true", "results": [ { "folder": "ENCSR000BSO.K562_myelogenous_leukemia.CREB1", "tf_name": "CREB1", "samples": [ { "cell": { "title": "K562 (myelogenous leukemia)" }, "biological_condition": "" } ], "references": [ { "identifier": "ENCODE:ENCSR000BSO" }, { "identifier": "GTRD:EXP010959" } ], "species": { "name": "Homo sapiens" }, "datasets": [ { "jaspar_id": "MA0018.4", "bed_filename": "macs/DAMO/ENCSR000BSO.K562_myelogenous_leukemia.CREB1/ENCSR000BSO.K562_myelogenous_leukemia.CREB1.MA0018.4.damo.bed", "fasta_filename": "macs/DAMO/ENCSR000BSO.K562_myelogenous_leukemia.CREB1/ENCSR000BSO.K562_myelogenous_leukemia.CREB1.MA0018.4.damo.fa", "profile_name": "CREB1", "synonyms": [ "CREB", "CREB-1", "active transcription factor CREB", "cAMP responsive element binding protein 1", "cAMP-response element-binding protein-1", "cyclic AMP-responsive element-binding protein 1", "cyclic adenosine 3',5'-monophosphate response element binding protein", "cyclic adenosine 3',5'-monophosphate response element-binding protein CREB", "transactivator protein" ] } ] }, { "folder": "ENCSR109YGM.K562_myelogenous_leukemia.CREB3L1", "tf_name": "CREB3L1", "samples": [ { "cell": { "title": "K562 (myelogenous leukemia)" }, "biological_condition": "" } ], "references": [ { "identifier": "ENCODE:ENCSR109YGM" }, { "identifier": "GTRD:EXP039691" } ], "species": { "name": "Homo sapiens" }, "datasets": [ { "jaspar_id": "MA0839.1", "bed_filename": "macs/DAMO/ENCSR109YGM.K562_myelogenous_leukemia.CREB3L1/ENCSR109YGM.K562_myelogenous_leukemia.CREB3L1.MA0839.1.damo.bed", "fasta_filename": "macs/DAMO/ENCSR109YGM.K562_myelogenous_leukemia.CREB3L1/ENCSR109YGM.K562_myelogenous_leukemia.CREB3L1.MA0839.1.damo.fa", "profile_name": "CREB3L1", "synonyms": [ "BBF-2 homolog", "OASIS", "OI16", "cAMP responsive element binding protein 3 like 1", "cAMP-responsive element-binding protein 3-like protein 1", "cyclic AMP-responsive element-binding protein 3-like protein 1", "old astrocyte specifically-induced substance" ] } ] }, { "folder": "ENCSR077DKV.K562_myelogenous_leukemia.CREM", "tf_name": "CREM", "samples": [ { "cell": { "title": "K562 (myelogenous leukemia)" }, "biological_condition": "" } ], "references": [ { "identifier": "ENCODE:ENCSR077DKV" }, { "identifier": "GTRD:EXP040185" } ], "species": { "name": "Homo sapiens" }, "datasets": [ { "jaspar_id": "MA0609.2", "bed_filename": "macs/DAMO/ENCSR077DKV.K562_myelogenous_leukemia.CREM/ENCSR077DKV.K562_myelogenous_leukemia.CREM.MA0609.2.damo.bed", "fasta_filename": "macs/DAMO/ENCSR077DKV.K562_myelogenous_leukemia.CREM/ENCSR077DKV.K562_myelogenous_leukemia.CREM.MA0609.2.damo.fa", "profile_name": "CREM", "synonyms": [ "CREM 2alpha-b protein", "CREM 2beta-a protein", "CREM-2", "ICER", "cAMP response element modulator", "cAMP responsive element modulator", "cAMP-responsive element modulator", "hCREM-2", "inducible cAMP early repressor ICER" ] } ] }, { "folder": "EXP032764.K562_myelogenous_leukemia.CTCF", "tf_name": "CTCF", "samples": [ { "cell": { "title": "K562 (myelogenous leukemia)" }, "biological_condition": "5-aza-2’-deoxycytidine (decitabine; Sigma, A3656) dissolved in DMSO to 10mM. Drug was administered at 1uM daily for 3 days. Control K562 cells were mock treated with DMSO." } ], "references": [ { "identifier": "GEO:GSM1224660" }, { "identifier": "GEO:GSE50610" }, { "identifier": "GEO:GSM1224659" }, { "identifier": "GTRD:EXP032764" } ], "species": { "name": "Homo sapiens" }, "datasets": [ { "jaspar_id": "MA0139.1", "bed_filename": "macs/DAMO/EXP032764.K562_myelogenous_leukemia.CTCF/EXP032764.K562_myelogenous_leukemia.CTCF.MA0139.1.damo.bed", "fasta_filename": "macs/DAMO/EXP032764.K562_myelogenous_leukemia.CTCF/EXP032764.K562_myelogenous_leukemia.CTCF.MA0139.1.damo.fa", "profile_name": "CTCF", "synonyms": [ "11 zinc finger transcriptional repressor", "11-zinc finger protein", "CCCTC-binding factor", "CCCTC-binding factor (zinc finger protein)", "CFAP108", "CTCFL paralog", "FAP108", "MRD21", "transcriptional repressor CTCF" ] } ] }, { "folder": "EXP033055.K562_myelogenous_leukemia.CTCF", "tf_name": "CTCF", "samples": [ { "cell": { "title": "K562 (myelogenous leukemia)" }, "biological_condition": "none" } ], "references": [ { "identifier": "GEO:GSE50611" }, { "identifier": "GEO:GSM1224675" }, { "identifier": "GEO:GSM1224674" }, { "identifier": "PUBMED:25580597" }, { "identifier": "GEO:GSM1224673" }, { "identifier": "GEO:GSM1224672" }, { "identifier": "GTRD:EXP033055" } ], "species": { "name": "Homo sapiens" }, "datasets": [ { "jaspar_id": "MA0139.1", "bed_filename": "macs/DAMO/EXP033055.K562_myelogenous_leukemia.CTCF/EXP033055.K562_myelogenous_leukemia.CTCF.MA0139.1.damo.bed", "fasta_filename": "macs/DAMO/EXP033055.K562_myelogenous_leukemia.CTCF/EXP033055.K562_myelogenous_leukemia.CTCF.MA0139.1.damo.fa", "profile_name": "CTCF", "synonyms": [ "11 zinc finger transcriptional repressor", "11-zinc finger protein", "CCCTC-binding factor", "CCCTC-binding factor (zinc finger protein)", "CFAP108", "CTCFL paralog", "FAP108", "MRD21", "transcriptional repressor CTCF" ] } ] }, { "folder": "EXP038268.K562_myelogenous_leukemia.CTCF", "tf_name": "CTCF", "samples": [ { "cell": { "title": "K562 (myelogenous leukemia)" }, "biological_condition": "+DOX 3 days, mutant CTCF" } ], "references": [ { "identifier": "GEO:GSM2439225" }, { "identifier": "GEO:GSE92879" }, { "identifier": "GTRD:EXP038268" } ], "species": { "name": "Homo sapiens" }, "datasets": [ { "jaspar_id": "MA0139.1", "bed_filename": "macs/DAMO/EXP038268.K562_myelogenous_leukemia.CTCF/EXP038268.K562_myelogenous_leukemia.CTCF.MA0139.1.damo.bed", "fasta_filename": "macs/DAMO/EXP038268.K562_myelogenous_leukemia.CTCF/EXP038268.K562_myelogenous_leukemia.CTCF.MA0139.1.damo.fa", "profile_name": "CTCF", "synonyms": [ "11 zinc finger transcriptional repressor", "11-zinc finger protein", "CCCTC-binding factor", "CCCTC-binding factor (zinc finger protein)", "CFAP108", "CTCFL paralog", "FAP108", "MRD21", "transcriptional repressor CTCF" ] } ] }, { "folder": "EXP054035.K562_myelogenous_leukemia.CTCF", "tf_name": "CTCF", "samples": [ { "cell": { "title": "K562 (myelogenous leukemia)" }, "biological_condition": "Treatment: None;" } ], "references": [ { "identifier": "PUBMED:22955616" }, { "identifier": "GEO:GSM733719" }, { "identifier": "GEO:GSE29611" }, { "identifier": "GTRD:EXP054035" } ], "species": { "name": "Homo sapiens" }, "datasets": [ { "jaspar_id": "MA0139.1", "bed_filename": "macs/DAMO/EXP054035.K562_myelogenous_leukemia.CTCF/EXP054035.K562_myelogenous_leukemia.CTCF.MA0139.1.damo.bed", "fasta_filename": "macs/DAMO/EXP054035.K562_myelogenous_leukemia.CTCF/EXP054035.K562_myelogenous_leukemia.CTCF.MA0139.1.damo.fa", "profile_name": "CTCF", "synonyms": [ "11 zinc finger transcriptional repressor", "11-zinc finger protein", "CCCTC-binding factor", "CCCTC-binding factor (zinc finger protein)", "CFAP108", "CTCFL paralog", "FAP108", "MRD21", "transcriptional repressor CTCF" ] } ] }, { "folder": "ENCSR000AKO.K562_myelogenous_leukemia.CTCF", "tf_name": "CTCF", "samples": [ { "cell": { "title": "K562 (myelogenous leukemia)" }, "biological_condition": "" } ], "references": [ { "identifier": "ENCODE:ENCSR000AKO" }, { "identifier": "GTRD:EXP011041" } ], "species": { "name": "Homo sapiens" }, "datasets": [ { "jaspar_id": "MA0139.1", "bed_filename": "macs/DAMO/ENCSR000AKO.K562_myelogenous_leukemia.CTCF/ENCSR000AKO.K562_myelogenous_leukemia.CTCF.MA0139.1.damo.bed", "fasta_filename": "macs/DAMO/ENCSR000AKO.K562_myelogenous_leukemia.CTCF/ENCSR000AKO.K562_myelogenous_leukemia.CTCF.MA0139.1.damo.fa", "profile_name": "CTCF", "synonyms": [ "11 zinc finger transcriptional repressor", "11-zinc finger protein", "CCCTC-binding factor", "CCCTC-binding factor (zinc finger protein)", "CFAP108", "CTCFL paralog", "FAP108", "MRD21", "transcriptional repressor CTCF" ] } ] }, { "folder": "ENCSR000BPJ.K562_myelogenous_leukemia.CTCF", "tf_name": "CTCF", "samples": [ { "cell": { "title": "K562 (myelogenous leukemia)" }, "biological_condition": "" } ], "references": [ { "identifier": "ENCODE:ENCSR000BPJ" }, { "identifier": "GTRD:EXP010302" }, { "identifier": "GTRD:EXP010304" } ], "species": { "name": "Homo sapiens" }, "datasets": [ { "jaspar_id": "MA0139.1", "bed_filename": "macs/DAMO/ENCSR000BPJ.K562_myelogenous_leukemia.CTCF/ENCSR000BPJ.K562_myelogenous_leukemia.CTCF.MA0139.1.damo.bed", "fasta_filename": "macs/DAMO/ENCSR000BPJ.K562_myelogenous_leukemia.CTCF/ENCSR000BPJ.K562_myelogenous_leukemia.CTCF.MA0139.1.damo.fa", "profile_name": "CTCF", "synonyms": [ "11 zinc finger transcriptional repressor", "11-zinc finger protein", "CCCTC-binding factor", "CCCTC-binding factor (zinc finger protein)", "CFAP108", "CTCFL paralog", "FAP108", "MRD21", "transcriptional repressor CTCF" ] } ] }, { "folder": "ENCSR000DMA.K562_myelogenous_leukemia.CTCF", "tf_name": "CTCF", "samples": [ { "cell": { "title": "K562 (myelogenous leukemia)" }, "biological_condition": "" } ], "references": [ { "identifier": "ENCODE:ENCSR000DMA" }, { "identifier": "GTRD:EXP010622" } ], "species": { "name": "Homo sapiens" }, "datasets": [ { "jaspar_id": "MA0139.1", "bed_filename": "macs/DAMO/ENCSR000DMA.K562_myelogenous_leukemia.CTCF/ENCSR000DMA.K562_myelogenous_leukemia.CTCF.MA0139.1.damo.bed", "fasta_filename": "macs/DAMO/ENCSR000DMA.K562_myelogenous_leukemia.CTCF/ENCSR000DMA.K562_myelogenous_leukemia.CTCF.MA0139.1.damo.fa", "profile_name": "CTCF", "synonyms": [ "11 zinc finger transcriptional repressor", "11-zinc finger protein", "CCCTC-binding factor", "CCCTC-binding factor (zinc finger protein)", "CFAP108", "CTCFL paralog", "FAP108", "MRD21", "transcriptional repressor CTCF" ] } ] } ] }