Datasets List
This API provides an easy-to-use REST web interface to query/retrieve data
from the UniBind database. The API comes with a human browsable interface and
also a programmatic interface which return the results in different formats,
including
json, jsonp, yaml,
bed, and also api for a browsable interface.
GET /api/v1/datasets/?format=api&page=2&q=MA0499.1&summary=true
{ "count": 38, "next": "https://unibind.uio.no/api/v1/datasets/?format=api&page=3&q=MA0499.1&summary=true", "previous": "https://unibind.uio.no/api/v1/datasets/?format=api&q=MA0499.1&summary=true", "results": [ { "folder": "EXP052252.embryonic_stem_cells.MYOD1", "tf_name": "MYOD1", "samples": [ { "cell": { "title": "embryonic stem cells" }, "biological_condition": "Treatment: no doxycycline no Source: SA-tTA-MyoD Embryonic Stem Cells Strain: MC1 mouse ES cells derived from 129S6/SvEvTac " } ], "references": [ { "identifier": "GEO:GSE97712" }, { "identifier": "GEO:GSM2576039" }, { "identifier": "PUBMED:29500235" }, { "identifier": "GTRD:EXP052252" } ], "species": { "name": "Mus musculus" }, "datasets": [ { "jaspar_id": "MA0499.2", "bed_filename": "macs/DAMO/EXP052252.embryonic_stem_cells.MYOD1/EXP052252.embryonic_stem_cells.MYOD1.MA0499.2.damo.bed", "fasta_filename": "macs/DAMO/EXP052252.embryonic_stem_cells.MYOD1/EXP052252.embryonic_stem_cells.MYOD1.MA0499.2.damo.fa", "profile_name": "MYOD1", "synonyms": [ "MYF3", "MYOD", "MYODRIF", "PUM", "bHLHc1", "class C basic helix-loop-helix protein 1", "myf-3", "myoblast determination protein 1", "myogenic differentiation 1", "myogenic factor 3" ] } ] }, { "folder": "EXP053652.Gastrocnemius_muscle.MYOD1", "tf_name": "MYOD1", "samples": [ { "cell": { "title": "Gastrocnemius muscle" }, "biological_condition": "Sex: male Strain: C57bl6 Time: collection on 24 hour timecourse" } ], "references": [ { "identifier": "GEO:GSE122082" }, { "identifier": "GEO:GSM3454527" }, { "identifier": "GTRD:EXP053652" } ], "species": { "name": "Mus musculus" }, "datasets": [ { "jaspar_id": "MA0499.2", "bed_filename": "macs/DAMO/EXP053652.Gastrocnemius_muscle.MYOD1/EXP053652.Gastrocnemius_muscle.MYOD1.MA0499.2.damo.bed", "fasta_filename": "macs/DAMO/EXP053652.Gastrocnemius_muscle.MYOD1/EXP053652.Gastrocnemius_muscle.MYOD1.MA0499.2.damo.fa", "profile_name": "MYOD1", "synonyms": [ "MYF3", "MYOD", "MYODRIF", "PUM", "bHLHc1", "class C basic helix-loop-helix protein 1", "myf-3", "myoblast determination protein 1", "myogenic differentiation 1", "myogenic factor 3" ] } ] }, { "folder": "EXP059211.primary_myoblasts.MYOD1", "tf_name": "MYOD1", "samples": [ { "cell": { "title": "primary myoblasts" }, "biological_condition": "Conditions: Growth Media; Genotype: Twist2-CreERT2 tdTO (Twist2 overexpression); Treatment: infected with GFP;" } ], "references": [ { "identifier": "GEO:GSM3659986" }, { "identifier": "GEO:GSE127998" }, { "identifier": "GEO:GSM3659987" }, { "identifier": "GTRD:EXP059211" } ], "species": { "name": "Mus musculus" }, "datasets": [ { "jaspar_id": "MA0499.2", "bed_filename": "macs/DAMO/EXP059211.primary_myoblasts.MYOD1/EXP059211.primary_myoblasts.MYOD1.MA0499.2.damo.bed", "fasta_filename": "macs/DAMO/EXP059211.primary_myoblasts.MYOD1/EXP059211.primary_myoblasts.MYOD1.MA0499.2.damo.fa", "profile_name": "MYOD1", "synonyms": [ "MYF3", "MYOD", "MYODRIF", "PUM", "bHLHc1", "class C basic helix-loop-helix protein 1", "myf-3", "myoblast determination protein 1", "myogenic differentiation 1", "myogenic factor 3" ] } ] }, { "folder": "EXP059212.primary_myoblasts.MYOD1", "tf_name": "MYOD1", "samples": [ { "cell": { "title": "primary myoblasts" }, "biological_condition": "Conditions: differentiation medium; Genotype: Twist2-CreERT2 tdTO (Twist2 overexpression); Treatment: infected with GFP;" } ], "references": [ { "identifier": "GEO:GSM3659995" }, { "identifier": "GEO:GSE127998" }, { "identifier": "GEO:GSM3659994" }, { "identifier": "GTRD:EXP059212" } ], "species": { "name": "Mus musculus" }, "datasets": [ { "jaspar_id": "MA0499.2", "bed_filename": "macs/DAMO/EXP059212.primary_myoblasts.MYOD1/EXP059212.primary_myoblasts.MYOD1.MA0499.2.damo.bed", "fasta_filename": "macs/DAMO/EXP059212.primary_myoblasts.MYOD1/EXP059212.primary_myoblasts.MYOD1.MA0499.2.damo.fa", "profile_name": "MYOD1", "synonyms": [ "MYF3", "MYOD", "MYODRIF", "PUM", "bHLHc1", "class C basic helix-loop-helix protein 1", "myf-3", "myoblast determination protein 1", "myogenic differentiation 1", "myogenic factor 3" ] } ] }, { "folder": "EXP059214.primary_myoblasts.MYOD1", "tf_name": "MYOD1", "samples": [ { "cell": { "title": "primary myoblasts" }, "biological_condition": "Conditions: Growth Media; Genotype: Twist2-CreERT2 tdTO (Twist2 overexpression); Treatment: infected with 3xTy1-Twist2;" } ], "references": [ { "identifier": "GEO:GSM3660003" }, { "identifier": "GEO:GSM3660004" }, { "identifier": "GEO:GSE127998" }, { "identifier": "GTRD:EXP059214" } ], "species": { "name": "Mus musculus" }, "datasets": [ { "jaspar_id": "MA0499.2", "bed_filename": "macs/DAMO/EXP059214.primary_myoblasts.MYOD1/EXP059214.primary_myoblasts.MYOD1.MA0499.2.damo.bed", "fasta_filename": "macs/DAMO/EXP059214.primary_myoblasts.MYOD1/EXP059214.primary_myoblasts.MYOD1.MA0499.2.damo.fa", "profile_name": "MYOD1", "synonyms": [ "MYF3", "MYOD", "MYODRIF", "PUM", "bHLHc1", "class C basic helix-loop-helix protein 1", "myf-3", "myoblast determination protein 1", "myogenic differentiation 1", "myogenic factor 3" ] } ] }, { "folder": "EXP059216.primary_myoblasts.MYOD1", "tf_name": "MYOD1", "samples": [ { "cell": { "title": "primary myoblasts" }, "biological_condition": "Conditions: differentiation medium; Genotype: Twist2-CreERT2 tdTO (Twist2 overexpression); Treatment: infected with 3xTy1-Twist2;" } ], "references": [ { "identifier": "GEO:GSM3660012" }, { "identifier": "GEO:GSM3660013" }, { "identifier": "GEO:GSE127998" }, { "identifier": "GTRD:EXP059216" } ], "species": { "name": "Mus musculus" }, "datasets": [ { "jaspar_id": "MA0499.2", "bed_filename": "macs/DAMO/EXP059216.primary_myoblasts.MYOD1/EXP059216.primary_myoblasts.MYOD1.MA0499.2.damo.bed", "fasta_filename": "macs/DAMO/EXP059216.primary_myoblasts.MYOD1/EXP059216.primary_myoblasts.MYOD1.MA0499.2.damo.fa", "profile_name": "MYOD1", "synonyms": [ "MYF3", "MYOD", "MYODRIF", "PUM", "bHLHc1", "class C basic helix-loop-helix protein 1", "myf-3", "myoblast determination protein 1", "myogenic differentiation 1", "myogenic factor 3" ] } ] }, { "folder": "EXP010382.myocytes.MYOD1", "tf_name": "MYOD1", "samples": [ { "cell": { "title": "myocytes" }, "biological_condition": "" } ], "references": [ { "identifier": "GEO:GSM915185" }, { "identifier": "ENCODE:ENCSR000AIH" }, { "identifier": "ENCODE:wgEncodeEM002129" }, { "identifier": "GTRD:EXP010382" } ], "species": { "name": "Mus musculus" }, "datasets": [ { "jaspar_id": "MA0499.2", "bed_filename": "macs/DAMO/EXP010382.myocytes.MYOD1/EXP010382.myocytes.MYOD1.MA0499.2.damo.bed", "fasta_filename": "macs/DAMO/EXP010382.myocytes.MYOD1/EXP010382.myocytes.MYOD1.MA0499.2.damo.fa", "profile_name": "MYOD1", "synonyms": [ "MYF3", "MYOD", "MYODRIF", "PUM", "bHLHc1", "class C basic helix-loop-helix protein 1", "myf-3", "myoblast determination protein 1", "myogenic differentiation 1", "myogenic factor 3" ] } ] }, { "folder": "EXP010480.myocytes.MYOD1", "tf_name": "MYOD1", "samples": [ { "cell": { "title": "myocytes" }, "biological_condition": "" } ], "references": [ { "identifier": "ENCODE:ENCSR000AIR" }, { "identifier": "ENCODE:wgEncodeEM002127" }, { "identifier": "GEO:GSM915183" }, { "identifier": "GTRD:EXP010480" } ], "species": { "name": "Mus musculus" }, "datasets": [ { "jaspar_id": "MA0499.2", "bed_filename": "macs/DAMO/EXP010480.myocytes.MYOD1/EXP010480.myocytes.MYOD1.MA0499.2.damo.bed", "fasta_filename": "macs/DAMO/EXP010480.myocytes.MYOD1/EXP010480.myocytes.MYOD1.MA0499.2.damo.fa", "profile_name": "MYOD1", "synonyms": [ "MYF3", "MYOD", "MYODRIF", "PUM", "bHLHc1", "class C basic helix-loop-helix protein 1", "myf-3", "myoblast determination protein 1", "myogenic differentiation 1", "myogenic factor 3" ] } ] }, { "folder": "EXP010522.myocytes.MYOD1", "tf_name": "MYOD1", "samples": [ { "cell": { "title": "myocytes" }, "biological_condition": "" } ], "references": [ { "identifier": "ENCODE:wgEncodeEM002130" }, { "identifier": "ENCODE:ENCSR000AIT" }, { "identifier": "GEO:GSM915165" }, { "identifier": "GTRD:EXP010522" } ], "species": { "name": "Mus musculus" }, "datasets": [ { "jaspar_id": "MA0499.2", "bed_filename": "macs/DAMO/EXP010522.myocytes.MYOD1/EXP010522.myocytes.MYOD1.MA0499.2.damo.bed", "fasta_filename": "macs/DAMO/EXP010522.myocytes.MYOD1/EXP010522.myocytes.MYOD1.MA0499.2.damo.fa", "profile_name": "MYOD1", "synonyms": [ "MYF3", "MYOD", "MYODRIF", "PUM", "bHLHc1", "class C basic helix-loop-helix protein 1", "myf-3", "myoblast determination protein 1", "myogenic differentiation 1", "myogenic factor 3" ] } ] }, { "folder": "EXP010557.C2C12_myoblasts.MYOD1", "tf_name": "MYOD1", "samples": [ { "cell": { "title": "C2C12 (myoblasts)" }, "biological_condition": "" } ], "references": [ { "identifier": "ENCODE:wgEncodeEM002128" }, { "identifier": "GEO:GSM915186" }, { "identifier": "ENCODE:ENCSR000AIG" }, { "identifier": "GTRD:EXP010557" } ], "species": { "name": "Mus musculus" }, "datasets": [ { "jaspar_id": "MA0499.2", "bed_filename": "macs/DAMO/EXP010557.C2C12_myoblasts.MYOD1/EXP010557.C2C12_myoblasts.MYOD1.MA0499.2.damo.bed", "fasta_filename": "macs/DAMO/EXP010557.C2C12_myoblasts.MYOD1/EXP010557.C2C12_myoblasts.MYOD1.MA0499.2.damo.fa", "profile_name": "MYOD1", "synonyms": [ "MYF3", "MYOD", "MYODRIF", "PUM", "bHLHc1", "class C basic helix-loop-helix protein 1", "myf-3", "myoblast determination protein 1", "myogenic differentiation 1", "myogenic factor 3" ] } ] } ] }