Datasets List
This API provides an easy-to-use REST web interface to query/retrieve data
from the UniBind database. The API comes with a human browsable interface and
also a programmatic interface which return the results in different formats,
including
json, jsonp, yaml,
bed, and also api for a browsable interface.
GET /api/v1/datasets/?collection=Robust&format=api&page=9&q=&species=6239&summary=true
{ "count": 91, "next": "https://unibind.uio.no/api/v1/datasets/?collection=Robust&format=api&page=10&q=&species=6239&summary=true", "previous": "https://unibind.uio.no/api/v1/datasets/?collection=Robust&format=api&page=8&q=&species=6239&summary=true", "results": [ { "folder": "EXP047075.Whole_worms_developmental_stage_L3.SNPC-4", "tf_name": "SNPC-4", "samples": [ { "cell": { "title": "Whole worms (developmental stage: L3)" }, "biological_condition": "Genotype: unc-119(ed3) III; wgIs179 [unc-119(+) gei-11::TY1::EGFP::3xFLAG]; Sex: Hermaphrodite;" } ], "references": [ { "identifier": "GEO:GSM864854" }, { "identifier": "GEO:GSE35276" }, { "identifier": "GTRD:EXP047075" } ], "species": { "name": "Caenorhabditis elegans" }, "datasets": [ { "jaspar_id": "MA0544.1", "bed_filename": "macs/DAMO/EXP047075.Whole_worms_developmental_stage_L3.SNPC-4/EXP047075.Whole_worms_developmental_stage_L3.SNPC-4.MA0544.1.damo.bed", "fasta_filename": "macs/DAMO/EXP047075.Whole_worms_developmental_stage_L3.SNPC-4/EXP047075.Whole_worms_developmental_stage_L3.SNPC-4.MA0544.1.damo.fa", "profile_name": "snpc-4", "synonyms": [ "CELE_F32H2.1", "snRNA-activating protein complex subunit 4 homolog" ] } ] }, { "folder": "EXP047130.Whole_worms_developmental_stage_L2.SNPC-4", "tf_name": "SNPC-4", "samples": [ { "cell": { "title": "Whole worms (developmental stage: L2)" }, "biological_condition": "Genotype: unc-119(ed3) III; wgIs179 [unc-119(+) gei-11::TY1::EGFP::3xFLAG]; Sex: Hermaphrodite;" } ], "references": [ { "identifier": "GEO:GSE37809" }, { "identifier": "GEO:GSM928366" }, { "identifier": "GTRD:EXP047130" } ], "species": { "name": "Caenorhabditis elegans" }, "datasets": [ { "jaspar_id": "MA0544.1", "bed_filename": "macs/DAMO/EXP047130.Whole_worms_developmental_stage_L2.SNPC-4/EXP047130.Whole_worms_developmental_stage_L2.SNPC-4.MA0544.1.damo.bed", "fasta_filename": "macs/DAMO/EXP047130.Whole_worms_developmental_stage_L2.SNPC-4/EXP047130.Whole_worms_developmental_stage_L2.SNPC-4.MA0544.1.damo.fa", "profile_name": "snpc-4", "synonyms": [ "CELE_F32H2.1", "snRNA-activating protein complex subunit 4 homolog" ] } ] }, { "folder": "EXP047131.Whole_worms_developmental_stage_L2.SNPC-4", "tf_name": "SNPC-4", "samples": [ { "cell": { "title": "Whole worms (developmental stage: L2)" }, "biological_condition": "Genotype: unc-119(ed3) III; wgIs179 [unc-119(+) gei-11::TY1::EGFP::3xFLAG]; Sex: Hermaphrodite;" } ], "references": [ { "identifier": "GEO:GSM928367" }, { "identifier": "GEO:GSE37809" }, { "identifier": "GTRD:EXP047131" } ], "species": { "name": "Caenorhabditis elegans" }, "datasets": [ { "jaspar_id": "MA0544.1", "bed_filename": "macs/DAMO/EXP047131.Whole_worms_developmental_stage_L2.SNPC-4/EXP047131.Whole_worms_developmental_stage_L2.SNPC-4.MA0544.1.damo.bed", "fasta_filename": "macs/DAMO/EXP047131.Whole_worms_developmental_stage_L2.SNPC-4/EXP047131.Whole_worms_developmental_stage_L2.SNPC-4.MA0544.1.damo.fa", "profile_name": "snpc-4", "synonyms": [ "CELE_F32H2.1", "snRNA-activating protein complex subunit 4 homolog" ] } ] }, { "folder": "EXP040429.Whole_worms_developmental_stage_L2.UNC-30", "tf_name": "UNC-30", "samples": [ { "cell": { "title": "Whole worms (developmental stage: L2)" }, "biological_condition": "" } ], "references": [ { "identifier": "PUBMED:29033363" }, { "identifier": "GEO:GSE102213" }, { "identifier": "GEO:GSM2730401" }, { "identifier": "GTRD:EXP040429" } ], "species": { "name": "Caenorhabditis elegans" }, "datasets": [ { "jaspar_id": "MA1443.1", "bed_filename": "macs/DAMO/EXP040429.Whole_worms_developmental_stage_L2.UNC-30/EXP040429.Whole_worms_developmental_stage_L2.UNC-30.MA1443.1.damo.bed", "fasta_filename": "macs/DAMO/EXP040429.Whole_worms_developmental_stage_L2.UNC-30/EXP040429.Whole_worms_developmental_stage_L2.UNC-30.MA1443.1.damo.fa", "profile_name": "unc-30", "synonyms": null } ] }, { "folder": "ENCSR119ZYX.Whole_worms_developmental_stage_young_adults.UNC-62", "tf_name": "UNC-62", "samples": [ { "cell": { "title": "Whole worms (developmental stage: young adults)" }, "biological_condition": "strain: OP600, genotype: unc119(ed3);wgIs600(unc-62::TY1 EGFP FLAG;unc119), sex:mixed" } ], "references": [ { "identifier": "ENCODE:ENCSR119ZYX" }, { "identifier": "GTRD:EXP043539" } ], "species": { "name": "Caenorhabditis elegans" }, "datasets": [ { "jaspar_id": "MA0918.1", "bed_filename": "macs/DAMO/ENCSR119ZYX.Whole_worms_developmental_stage_young_adults.UNC-62/ENCSR119ZYX.Whole_worms_developmental_stage_young_adults.UNC-62.MA0918.1.damo.bed", "fasta_filename": "macs/DAMO/ENCSR119ZYX.Whole_worms_developmental_stage_young_adults.UNC-62/ENCSR119ZYX.Whole_worms_developmental_stage_young_adults.UNC-62.MA0918.1.damo.fa", "profile_name": "unc-62", "synonyms": null } ] }, { "folder": "ENCSR091FUG.Whole_worms_developmental_stage_L3.UNC-62", "tf_name": "UNC-62", "samples": [ { "cell": { "title": "Whole worms (developmental stage: L3)" }, "biological_condition": "strain: OP600, genotype: unc119(ed3);wgIs600(unc-62::TY1 EGFP FLAG;unc119), sex:mixed" } ], "references": [ { "identifier": "ENCODE:ENCSR091FUG" }, { "identifier": "GTRD:EXP043874" } ], "species": { "name": "Caenorhabditis elegans" }, "datasets": [ { "jaspar_id": "MA0918.1", "bed_filename": "macs/DAMO/ENCSR091FUG.Whole_worms_developmental_stage_L3.UNC-62/ENCSR091FUG.Whole_worms_developmental_stage_L3.UNC-62.MA0918.1.damo.bed", "fasta_filename": "macs/DAMO/ENCSR091FUG.Whole_worms_developmental_stage_L3.UNC-62/ENCSR091FUG.Whole_worms_developmental_stage_L3.UNC-62.MA0918.1.damo.fa", "profile_name": "unc-62", "synonyms": null } ] }, { "folder": "ENCSR927RAW.Whole_worms_mixed-stage_embryos.UNC-62", "tf_name": "UNC-62", "samples": [ { "cell": { "title": "Whole worms (mixed-stage embryos)" }, "biological_condition": "strain: OP600, genotype: unc119(ed3);wgIs600(unc-62::TY1 EGFP FLAG;unc119), sex:mixed" } ], "references": [ { "identifier": "ENCODE:ENCSR927RAW" }, { "identifier": "GTRD:EXP043927" } ], "species": { "name": "Caenorhabditis elegans" }, "datasets": [ { "jaspar_id": "MA0918.1", "bed_filename": "macs/DAMO/ENCSR927RAW.Whole_worms_mixed-stage_embryos.UNC-62/ENCSR927RAW.Whole_worms_mixed-stage_embryos.UNC-62.MA0918.1.damo.bed", "fasta_filename": "macs/DAMO/ENCSR927RAW.Whole_worms_mixed-stage_embryos.UNC-62/ENCSR927RAW.Whole_worms_mixed-stage_embryos.UNC-62.MA0918.1.damo.fa", "profile_name": "unc-62", "synonyms": null } ] }, { "folder": "EXP047186.Whole_wormsdevelomental_stage_day_4_young_adult.UNC-62", "tf_name": "UNC-62", "samples": [ { "cell": { "title": "Whole worms(develomental stage: day 4 young adult)" }, "biological_condition": "Genotype: unc119(ed3);wgIs600(unc-62::TY1 EGFP FLAG;unc119); Sex: hermophrodite;" } ], "references": [ { "identifier": "GEO:GSE38436" }, { "identifier": "GEO:GSM942047" }, { "identifier": "GTRD:EXP047186" } ], "species": { "name": "Caenorhabditis elegans" }, "datasets": [ { "jaspar_id": "MA0918.1", "bed_filename": "macs/DAMO/EXP047186.Whole_wormsdevelomental_stage_day_4_young_adult.UNC-62/EXP047186.Whole_wormsdevelomental_stage_day_4_young_adult.UNC-62.MA0918.1.damo.bed", "fasta_filename": "macs/DAMO/EXP047186.Whole_wormsdevelomental_stage_day_4_young_adult.UNC-62/EXP047186.Whole_wormsdevelomental_stage_day_4_young_adult.UNC-62.MA0918.1.damo.fa", "profile_name": "unc-62", "synonyms": null } ] }, { "folder": "EXP047187.Whole_wormsdevelomental_stage_day_4_young_adult.UNC-62", "tf_name": "UNC-62", "samples": [ { "cell": { "title": "Whole worms(develomental stage: day 4 young adult)" }, "biological_condition": "Genotype: unc119(ed3);wgIs600(unc-62::TY1 EGFP FLAG;unc119); Sex: hermophrodite;" } ], "references": [ { "identifier": "GEO:GSE38436" }, { "identifier": "GEO:GSM942048" }, { "identifier": "GTRD:EXP047187" } ], "species": { "name": "Caenorhabditis elegans" }, "datasets": [ { "jaspar_id": "MA0918.1", "bed_filename": "macs/DAMO/EXP047187.Whole_wormsdevelomental_stage_day_4_young_adult.UNC-62/EXP047187.Whole_wormsdevelomental_stage_day_4_young_adult.UNC-62.MA0918.1.damo.bed", "fasta_filename": "macs/DAMO/EXP047187.Whole_wormsdevelomental_stage_day_4_young_adult.UNC-62/EXP047187.Whole_wormsdevelomental_stage_day_4_young_adult.UNC-62.MA0918.1.damo.fa", "profile_name": "unc-62", "synonyms": null } ] }, { "folder": "ENCSR807UTG.Whole_worms_developmental_stage_L1.UNC-86", "tf_name": "UNC-86", "samples": [ { "cell": { "title": "Whole worms (developmental stage: L1)" }, "biological_condition": "strain: OP476, genotype: unc-119(tm4063) III; wgIs476., sex:hermaphrodite" } ], "references": [ { "identifier": "ENCODE:ENCSR807UTG" }, { "identifier": "GTRD:EXP043488" } ], "species": { "name": "Caenorhabditis elegans" }, "datasets": [ { "jaspar_id": "MA0926.1", "bed_filename": "macs/DAMO/ENCSR807UTG.Whole_worms_developmental_stage_L1.UNC-86/ENCSR807UTG.Whole_worms_developmental_stage_L1.UNC-86.MA0926.1.damo.bed", "fasta_filename": "macs/DAMO/ENCSR807UTG.Whole_worms_developmental_stage_L1.UNC-86/ENCSR807UTG.Whole_worms_developmental_stage_L1.UNC-86.MA0926.1.damo.fa", "profile_name": "unc-86", "synonyms": [ "CELE_C30A5.7", "Transcription factor unc-86" ] } ] } ] }