Datasets List
This API provides an easy-to-use REST web interface to query/retrieve data
from the UniBind database. The API comes with a human browsable interface and
also a programmatic interface which return the results in different formats,
including
json, jsonp, yaml,
bed, and also api for a browsable interface.
GET /api/v1/datasets/?collection=Robust&format=api&page=8&q=&species=3702&summary=true
{ "count": 78, "next": null, "previous": "https://unibind.uio.no/api/v1/datasets/?collection=Robust&format=api&page=7&q=&species=3702&summary=true", "results": [ { "folder": "EXP041471.12_day_old_seedlings.WRKY18", "tf_name": "WRKY18", "samples": [ { "cell": { "title": "12 day old seedlings" }, "biological_condition": "untreated" } ], "references": [ { "identifier": "GEO:GSE85922" }, { "identifier": "PUBMED:28011690" }, { "identifier": "GEO:GSM2287862" }, { "identifier": "GTRD:EXP041471" } ], "species": { "name": "Arabidopsis thaliana" }, "datasets": [ { "jaspar_id": "MA1077.1", "bed_filename": "macs/DAMO/EXP041471.12_day_old_seedlings.WRKY18/EXP041471.12_day_old_seedlings.WRKY18.MA1077.1.damo.bed", "fasta_filename": "macs/DAMO/EXP041471.12_day_old_seedlings.WRKY18/EXP041471.12_day_old_seedlings.WRKY18.MA1077.1.damo.fa", "profile_name": "WRKY18", "synonyms": [ "ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 18", "AT4G31800", "ATWRKY18", "F11C18.16", "WRKY DNA-binding protein 18" ] } ] }, { "folder": "EXP041472.12_day_old_seedlings.WRKY18", "tf_name": "WRKY18", "samples": [ { "cell": { "title": "12 day old seedlings" }, "biological_condition": "flg22-treated" } ], "references": [ { "identifier": "GEO:GSE85922" }, { "identifier": "PUBMED:28011690" }, { "identifier": "GEO:GSM2287863" }, { "identifier": "GTRD:EXP041472" } ], "species": { "name": "Arabidopsis thaliana" }, "datasets": [ { "jaspar_id": "MA1077.1", "bed_filename": "macs/DAMO/EXP041472.12_day_old_seedlings.WRKY18/EXP041472.12_day_old_seedlings.WRKY18.MA1077.1.damo.bed", "fasta_filename": "macs/DAMO/EXP041472.12_day_old_seedlings.WRKY18/EXP041472.12_day_old_seedlings.WRKY18.MA1077.1.damo.fa", "profile_name": "WRKY18", "synonyms": [ "ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 18", "AT4G31800", "ATWRKY18", "F11C18.16", "WRKY DNA-binding protein 18" ] } ] }, { "folder": "EXP041478.12_day_old_seedlings.WRKY18", "tf_name": "WRKY18", "samples": [ { "cell": { "title": "12 day old seedlings" }, "biological_condition": "flg22-treated" } ], "references": [ { "identifier": "GEO:GSM2287871" }, { "identifier": "GEO:GSE85922" }, { "identifier": "PUBMED:28011690" }, { "identifier": "GTRD:EXP041478" } ], "species": { "name": "Arabidopsis thaliana" }, "datasets": [ { "jaspar_id": "MA1077.1", "bed_filename": "macs/DAMO/EXP041478.12_day_old_seedlings.WRKY18/EXP041478.12_day_old_seedlings.WRKY18.MA1077.1.damo.bed", "fasta_filename": "macs/DAMO/EXP041478.12_day_old_seedlings.WRKY18/EXP041478.12_day_old_seedlings.WRKY18.MA1077.1.damo.fa", "profile_name": "WRKY18", "synonyms": [ "ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 18", "AT4G31800", "ATWRKY18", "F11C18.16", "WRKY DNA-binding protein 18" ] } ] }, { "folder": "EXP041366.4_week_old_mature_leaves.WRKY33", "tf_name": "WRKY33", "samples": [ { "cell": { "title": "4 week old mature leaves" }, "biological_condition": "14 hour post inoculation with spores of Botrytis cinerea 2100" } ], "references": [ { "identifier": "GEO:GSM1618745" }, { "identifier": "PUBMED:26076231" }, { "identifier": "GEO:GSE66289" }, { "identifier": "GEO:GSM1618746" }, { "identifier": "GTRD:EXP041366" } ], "species": { "name": "Arabidopsis thaliana" }, "datasets": [ { "jaspar_id": "MA1301.1", "bed_filename": "macs/DAMO/EXP041366.4_week_old_mature_leaves.WRKY33/EXP041366.4_week_old_mature_leaves.WRKY33.MA1301.1.damo.bed", "fasta_filename": "macs/DAMO/EXP041366.4_week_old_mature_leaves.WRKY33/EXP041366.4_week_old_mature_leaves.WRKY33.MA1301.1.damo.fa", "profile_name": "WRKY33", "synonyms": [ "AT2G38470", "ATWRKY33", "T19C21.4", "T19C21_4", "WRKY DNA-BINDING PROTEIN 33", "WRKY DNA-binding protein 33" ] } ] }, { "folder": "EXP041469.12_day_old_seedlings.WRKY33", "tf_name": "WRKY33", "samples": [ { "cell": { "title": "12 day old seedlings" }, "biological_condition": "untreated" } ], "references": [ { "identifier": "GEO:GSE85922" }, { "identifier": "PUBMED:28011690" }, { "identifier": "GEO:GSM2287860" }, { "identifier": "GTRD:EXP041469" } ], "species": { "name": "Arabidopsis thaliana" }, "datasets": [ { "jaspar_id": "MA1301.1", "bed_filename": "macs/DAMO/EXP041469.12_day_old_seedlings.WRKY33/EXP041469.12_day_old_seedlings.WRKY33.MA1301.1.damo.bed", "fasta_filename": "macs/DAMO/EXP041469.12_day_old_seedlings.WRKY33/EXP041469.12_day_old_seedlings.WRKY33.MA1301.1.damo.fa", "profile_name": "WRKY33", "synonyms": [ "AT2G38470", "ATWRKY33", "T19C21.4", "T19C21_4", "WRKY DNA-BINDING PROTEIN 33", "WRKY DNA-binding protein 33" ] } ] }, { "folder": "EXP041470.12_day_old_seedlings.WRKY33", "tf_name": "WRKY33", "samples": [ { "cell": { "title": "12 day old seedlings" }, "biological_condition": "flg22-treated" } ], "references": [ { "identifier": "PUBMED:28011690" }, { "identifier": "GEO:GSM2287861" }, { "identifier": "GEO:GSE85922" }, { "identifier": "GTRD:EXP041470" } ], "species": { "name": "Arabidopsis thaliana" }, "datasets": [ { "jaspar_id": "MA1301.1", "bed_filename": "macs/DAMO/EXP041470.12_day_old_seedlings.WRKY33/EXP041470.12_day_old_seedlings.WRKY33.MA1301.1.damo.bed", "fasta_filename": "macs/DAMO/EXP041470.12_day_old_seedlings.WRKY33/EXP041470.12_day_old_seedlings.WRKY33.MA1301.1.damo.fa", "profile_name": "WRKY33", "synonyms": [ "AT2G38470", "ATWRKY33", "T19C21.4", "T19C21_4", "WRKY DNA-BINDING PROTEIN 33", "WRKY DNA-binding protein 33" ] } ] }, { "folder": "EXP041474.12_day_old_seedlings.WRKY40", "tf_name": "WRKY40", "samples": [ { "cell": { "title": "12 day old seedlings" }, "biological_condition": "flg22-treated" } ], "references": [ { "identifier": "GEO:GSM2287865" }, { "identifier": "GEO:GSE85922" }, { "identifier": "PUBMED:28011690" }, { "identifier": "GTRD:EXP041474" } ], "species": { "name": "Arabidopsis thaliana" }, "datasets": [ { "jaspar_id": "MA1085.2", "bed_filename": "macs/DAMO/EXP041474.12_day_old_seedlings.WRKY40/EXP041474.12_day_old_seedlings.WRKY40.MA1085.2.damo.bed", "fasta_filename": "macs/DAMO/EXP041474.12_day_old_seedlings.WRKY40/EXP041474.12_day_old_seedlings.WRKY40.MA1085.2.damo.fa", "profile_name": "WRKY40", "synonyms": [ "AT1G80840", "ATWRKY40", "F23A5.19", "F23A5_19", "WRKY DNA-binding protein 40" ] } ] }, { "folder": "EXP041480.12_day_old_seedlings.WRKY40", "tf_name": "WRKY40", "samples": [ { "cell": { "title": "12 day old seedlings" }, "biological_condition": "flg22-treated" } ], "references": [ { "identifier": "GEO:GSE85922" }, { "identifier": "PUBMED:28011690" }, { "identifier": "GEO:GSM2287873" }, { "identifier": "GTRD:EXP041480" } ], "species": { "name": "Arabidopsis thaliana" }, "datasets": [ { "jaspar_id": "MA1085.2", "bed_filename": "macs/DAMO/EXP041480.12_day_old_seedlings.WRKY40/EXP041480.12_day_old_seedlings.WRKY40.MA1085.2.damo.bed", "fasta_filename": "macs/DAMO/EXP041480.12_day_old_seedlings.WRKY40/EXP041480.12_day_old_seedlings.WRKY40.MA1085.2.damo.fa", "profile_name": "WRKY40", "synonyms": [ "AT1G80840", "ATWRKY40", "F23A5.19", "F23A5_19", "WRKY DNA-binding protein 40" ] } ] } ] }