Datasets List
This API provides an easy-to-use REST web interface to query/retrieve data
from the UniBind database. The API comes with a human browsable interface and
also a programmatic interface which return the results in different formats,
including
json
, jsonp
, yaml
,
bed
, and also api
for a browsable interface.
GET /api/v1/datasets/?collection=Robust&format=api&page=4&q=&species=7227&summary=true
https://unibind.uio.no/api/v1/datasets/?collection=Robust&format=api&page=5&q=&species=7227&summary=true", "previous": "https://unibind.uio.no/api/v1/datasets/?collection=Robust&format=api&page=3&q=&species=7227&summary=true", "results": [ { "folder": "EXP052904.S2_Schneider_2.CLAMP", "tf_name": "CLAMP", "samples": [ { "cell": { "title": "S2 (Schneider 2)" }, "biological_condition": "Genotype: trl RNAi Sex: male" } ], "references": [ { "identifier": "PUBMED:30541149" }, { "identifier": "GEO:GSM3381138" }, { "identifier": "GEO:GSE119708" }, { "identifier": "GTRD:EXP052904" } ], "species": { "name": "Drosophila melanogaster" }, "datasets": [ { "jaspar_id": "MA1700.1", "bed_filename": "macs/DAMO/EXP052904.S2_Schneider_2.CLAMP/EXP052904.S2_Schneider_2.CLAMP.MA1700.1.damo.bed", "fasta_filename": "macs/DAMO/EXP052904.S2_Schneider_2.CLAMP/EXP052904.S2_Schneider_2.CLAMP.MA1700.1.damo.fa", "profile_name": "Clamp", "synonyms": null } ] }, { "folder": "EXP052905.S2_Schneider_2.CLAMP", "tf_name": "CLAMP", "samples": [ { "cell": { "title": "S2 (Schneider 2)" }, "biological_condition": "Genotype: trl RNAi Sex: male" } ], "references": [ { "identifier": "GEO:GSM3381139" }, { "identifier": "PUBMED:30541149" }, { "identifier": "GEO:GSE119708" }, { "identifier": "GTRD:EXP052905" } ], "species": { "name": "Drosophila melanogaster" }, "datasets": [ { "jaspar_id": "MA1700.1", "bed_filename": "macs/DAMO/EXP052905.S2_Schneider_2.CLAMP/EXP052905.S2_Schneider_2.CLAMP.MA1700.1.damo.bed", "fasta_filename": "macs/DAMO/EXP052905.S2_Schneider_2.CLAMP/EXP052905.S2_Schneider_2.CLAMP.MA1700.1.damo.fa", "profile_name": "Clamp", "synonyms": null } ] }, { "folder": "ENCSR661BEZ.whole_organism_development_stage_embryonic.CTCF", "tf_name": "CTCF", "samples": [ { "cell": { "title": "whole organism (development stage: embryonic)" }, "biological_condition": "strain: CTCF-GFP, genotype: y[1] w[*]; P{y[+7.7] w[+mC]=CTCF-GFP.FPTB}attP40, sex:mixed" } ], "references": [ { "identifier": "ENCODE:ENCSR661BEZ" }, { "identifier": "GTRD:EXP044078" } ], "species": { "name": "Drosophila melanogaster" }, "datasets": [ { "jaspar_id": "MA0531.1", "bed_filename": "macs/DAMO/ENCSR661BEZ.whole_organism_development_stage_embryonic.CTCF/ENCSR661BEZ.whole_organism_development_stage_embryonic.CTCF.MA0531.1.damo.bed", "fasta_filename": "macs/DAMO/ENCSR661BEZ.whole_organism_development_stage_embryonic.CTCF/ENCSR661BEZ.whole_organism_development_stage_embryonic.CTCF.MA0531.1.damo.fa", "profile_name": "CTCF", "synonyms": null } ] }, { "folder": "EXP044139.S2-DRSC_embryonic_stem_cells.CTCF", "tf_name": "CTCF", "samples": [ { "cell": { "title": "S2-DRSC (embryonic stem cells)" }, "biological_condition": "strain: Oregon-R, genotype: wild type" } ], "references": [ { "identifier": "ENCODE:ENCSR711UTK" }, { "identifier": "GEO:GSM499651" }, { "identifier": "GTRD:EXP044139" } ], "species": { "name": "Drosophila melanogaster" }, "datasets": [ { "jaspar_id": "MA0531.1", "bed_filename": "macs/DAMO/EXP044139.S2-DRSC_embryonic_stem_cells.CTCF/EXP044139.S2-DRSC_embryonic_stem_cells.CTCF.MA0531.1.damo.bed", "fasta_filename": "macs/DAMO/EXP044139.S2-DRSC_embryonic_stem_cells.CTCF/EXP044139.S2-DRSC_embryonic_stem_cells.CTCF.MA0531.1.damo.fa", "profile_name": "CTCF", "synonyms": null } ] }, { "folder": "EXP044218.S2-DRSC_embryonic_stem_cells.CTCF", "tf_name": "CTCF", "samples": [ { "cell": { "title": "S2-DRSC (embryonic stem cells)" }, "biological_condition": "strain: Oregon-R, genotype: wild type" } ], "references": [ { "identifier": "GEO:GSM499649" }, { "identifier": "ENCODE:ENCSR918GXT" }, { "identifier": "GTRD:EXP044218" } ], "species": { "name": "Drosophila melanogaster" }, "datasets": [ { "jaspar_id": "MA0531.1", "bed_filename": "macs/DAMO/EXP044218.S2-DRSC_embryonic_stem_cells.CTCF/EXP044218.S2-DRSC_embryonic_stem_cells.CTCF.MA0531.1.damo.bed", "fasta_filename": "macs/DAMO/EXP044218.S2-DRSC_embryonic_stem_cells.CTCF/EXP044218.S2-DRSC_embryonic_stem_cells.CTCF.MA0531.1.damo.fa", "profile_name": "CTCF", "synonyms": null } ] }, { "folder": "EXP045367.whole_organism_development_stage_prepupa.CTCF", "tf_name": "CTCF", "samples": [ { "cell": { "title": "whole organism (development stage: prepupa)" }, "biological_condition": "white prepupae stage" } ], "references": [ { "identifier": "GEO:GSE24449" }, { "identifier": "GEO:GSM602326" }, { "identifier": "PUBMED:23139640" }, { "identifier": "GTRD:EXP045367" } ], "species": { "name": "Drosophila melanogaster" }, "datasets": [ { "jaspar_id": "MA0531.1", "bed_filename": "macs/DAMO/EXP045367.whole_organism_development_stage_prepupa.CTCF/EXP045367.whole_organism_development_stage_prepupa.CTCF.MA0531.1.damo.bed", "fasta_filename": "macs/DAMO/EXP045367.whole_organism_development_stage_prepupa.CTCF/EXP045367.whole_organism_development_stage_prepupa.CTCF.MA0531.1.damo.fa", "profile_name": "CTCF", "synonyms": null } ] }, { "folder": "EXP045430.Kc167_development_stage_embryonic.CTCF", "tf_name": "CTCF", "samples": [ { "cell": { "title": "Kc167 (development stage: embryonic)" }, "biological_condition": "20-HE 0 hrs" } ], "references": [ { "identifier": "GEO:GSE30740" }, { "identifier": "GEO:GSM762842" }, { "identifier": "PUBMED:21981916" }, { "identifier": "PUBMED:23403565" }, { "identifier": "GTRD:EXP045430" } ], "species": { "name": "Drosophila melanogaster" }, "datasets": [ { "jaspar_id": "MA0531.1", "bed_filename": "macs/DAMO/EXP045430.Kc167_development_stage_embryonic.CTCF/EXP045430.Kc167_development_stage_embryonic.CTCF.MA0531.1.damo.bed", "fasta_filename": "macs/DAMO/EXP045430.Kc167_development_stage_embryonic.CTCF/EXP045430.Kc167_development_stage_embryonic.CTCF.MA0531.1.damo.fa", "profile_name": "CTCF", "synonyms": null } ] }, { "folder": "EXP045431.Kc167_development_stage_embryonic.CTCF", "tf_name": "CTCF", "samples": [ { "cell": { "title": "Kc167 (development stage: embryonic)" }, "biological_condition": "20-HE 3 hrs" } ], "references": [ { "identifier": "PUBMED:23403565" }, { "identifier": "GEO:GSE30740" }, { "identifier": "GEO:GSM762843" }, { "identifier": "PUBMED:21981916" }, { "identifier": "GTRD:EXP045431" } ], "species": { "name": "Drosophila melanogaster" }, "datasets": [ { "jaspar_id": "MA0531.1", "bed_filename": "macs/DAMO/EXP045431.Kc167_development_stage_embryonic.CTCF/EXP045431.Kc167_development_stage_embryonic.CTCF.MA0531.1.damo.bed", "fasta_filename": "macs/DAMO/EXP045431.Kc167_development_stage_embryonic.CTCF/EXP045431.Kc167_development_stage_embryonic.CTCF.MA0531.1.damo.fa", "profile_name": "CTCF", "synonyms": null } ] }, { "folder": "EXP045432.Kc167_development_stage_embryonic.CTCF", "tf_name": "CTCF", "samples": [ { "cell": { "title": "Kc167 (development stage: embryonic)" }, "biological_condition": "20-HE 48 hrs" } ], "references": [ { "identifier": "PUBMED:21981916" }, { "identifier": "PUBMED:23403565" }, { "identifier": "GEO:GSM762844" }, { "identifier": "GEO:GSE30740" }, { "identifier": "GTRD:EXP045432" } ], "species": { "name": "Drosophila melanogaster" }, "datasets": [ { "jaspar_id": "MA0531.1", "bed_filename": "macs/DAMO/EXP045432.Kc167_development_stage_embryonic.CTCF/EXP045432.Kc167_development_stage_embryonic.CTCF.MA0531.1.damo.bed", "fasta_filename": "macs/DAMO/EXP045432.Kc167_development_stage_embryonic.CTCF/EXP045432.Kc167_development_stage_embryonic.CTCF.MA0531.1.damo.fa", "profile_name": "CTCF", "synonyms": null } ] }, { "folder": "EXP045456.Kc167_development_stage_embryonic.CTCF", "tf_name": "CTCF", "samples": [ { "cell": { "title": "Kc167 (development stage: embryonic)" }, "biological_condition": "Interphase" } ], "references": [ { "identifier": "GEO:GSE32584" }, { "identifier": "GEO:GSM807543" }, { "identifier": "PUBMED:23403565" }, { "identifier": "GTRD:EXP045456" } ], "species": { "name": "Drosophila melanogaster" }, "datasets": [ { "jaspar_id": "MA0531.1", "bed_filename": "macs/DAMO/EXP045456.Kc167_development_stage_embryonic.CTCF/EXP045456.Kc167_development_stage_embryonic.CTCF.MA0531.1.damo.bed", "fasta_filename": "macs/DAMO/EXP045456.Kc167_development_stage_embryonic.CTCF/EXP045456.Kc167_development_stage_embryonic.CTCF.MA0531.1.damo.fa", "profile_name": "CTCF", "synonyms": null } ] } ] }{ "count": 109, "next": "