Datasets List
This API provides an easy-to-use REST web interface to query/retrieve data
from the UniBind database. The API comes with a human browsable interface and
also a programmatic interface which return the results in different formats,
including
json, jsonp, yaml,
bed, and also api for a browsable interface.
GET /api/v1/datasets/?collection=Robust&format=api&page=4&q=&species=10116&summary=true
{ "count": 41, "next": "https://unibind.uio.no/api/v1/datasets/?collection=Robust&format=api&page=5&q=&species=10116&summary=true", "previous": "https://unibind.uio.no/api/v1/datasets/?collection=Robust&format=api&page=3&q=&species=10116&summary=true", "results": [ { "folder": "EXP031202.Schwann_cells.SOX10", "tf_name": "SOX10", "samples": [ { "cell": { "title": "Schwann cells" }, "biological_condition": "" } ], "references": [ { "identifier": "GEO:GSM862402" }, { "identifier": "PUBMED:22492709" }, { "identifier": "GEO:GSM862401" }, { "identifier": "GEO:GSE35132" }, { "identifier": "GEO:GSM862404" }, { "identifier": "GTRD:EXP031202" } ], "species": { "name": "Rattus norvegicus" }, "datasets": [ { "jaspar_id": "MA0442.2", "bed_filename": "macs/DAMO/EXP031202.Schwann_cells.SOX10/EXP031202.Schwann_cells.SOX10.MA0442.2.damo.bed", "fasta_filename": "macs/DAMO/EXP031202.Schwann_cells.SOX10/EXP031202.Schwann_cells.SOX10.MA0442.2.damo.fa", "profile_name": "SOX10", "synonyms": [ "DOM", "PCWH", "SOX-10", "SRY (sex determining region Y)-box 10", "SRY-box 10", "SRY-box transcription factor 10", "SRY-related HMG-box gene 10", "WS2E", "WS4", "WS4C", "dominant megacolon, mouse, human homolog of", "transcription factor SOX-10" ] } ] }, { "folder": "EXP034467.spinal_cord.SOX10", "tf_name": "SOX10", "samples": [ { "cell": { "title": "spinal cord" }, "biological_condition": "" } ], "references": [ { "identifier": "GEO:GSM1577134" }, { "identifier": "GEO:GSE64703" }, { "identifier": "GEO:GSM1577133" }, { "identifier": "PUBMED:23966833" }, { "identifier": "PUBMED:25974668" }, { "identifier": "GTRD:EXP034467" } ], "species": { "name": "Rattus norvegicus" }, "datasets": [ { "jaspar_id": "MA0442.2", "bed_filename": "macs/DAMO/EXP034467.spinal_cord.SOX10/EXP034467.spinal_cord.SOX10.MA0442.2.damo.bed", "fasta_filename": "macs/DAMO/EXP034467.spinal_cord.SOX10/EXP034467.spinal_cord.SOX10.MA0442.2.damo.fa", "profile_name": "SOX10", "synonyms": [ "DOM", "PCWH", "SOX-10", "SRY (sex determining region Y)-box 10", "SRY-box 10", "SRY-box transcription factor 10", "SRY-related HMG-box gene 10", "WS2E", "WS4", "WS4C", "dominant megacolon, mouse, human homolog of", "transcription factor SOX-10" ] } ] }, { "folder": "EXP034468.sciatic_nerve.SOX10", "tf_name": "SOX10", "samples": [ { "cell": { "title": "sciatic nerve" }, "biological_condition": "" } ], "references": [ { "identifier": "GEO:GSM1577136" }, { "identifier": "PUBMED:23966833" }, { "identifier": "PUBMED:25974668" }, { "identifier": "GEO:GSE64703" }, { "identifier": "GEO:GSM1577135" }, { "identifier": "GTRD:EXP034468" } ], "species": { "name": "Rattus norvegicus" }, "datasets": [ { "jaspar_id": "MA0442.2", "bed_filename": "macs/DAMO/EXP034468.sciatic_nerve.SOX10/EXP034468.sciatic_nerve.SOX10.MA0442.2.damo.bed", "fasta_filename": "macs/DAMO/EXP034468.sciatic_nerve.SOX10/EXP034468.sciatic_nerve.SOX10.MA0442.2.damo.fa", "profile_name": "SOX10", "synonyms": [ "DOM", "PCWH", "SOX-10", "SRY (sex determining region Y)-box 10", "SRY-box 10", "SRY-box transcription factor 10", "SRY-related HMG-box gene 10", "WS2E", "WS4", "WS4C", "dominant megacolon, mouse, human homolog of", "transcription factor SOX-10" ] } ] }, { "folder": "EXP035490.oligodendrocytes.SOX10", "tf_name": "SOX10", "samples": [ { "cell": { "title": "oligodendrocytes" }, "biological_condition": "" } ], "references": [ { "identifier": "GEO:GSM1869163" }, { "identifier": "GEO:GSE72725" }, { "identifier": "GTRD:EXP035490" } ], "species": { "name": "Rattus norvegicus" }, "datasets": [ { "jaspar_id": "MA0442.2", "bed_filename": "macs/DAMO/EXP035490.oligodendrocytes.SOX10/EXP035490.oligodendrocytes.SOX10.MA0442.2.damo.bed", "fasta_filename": "macs/DAMO/EXP035490.oligodendrocytes.SOX10/EXP035490.oligodendrocytes.SOX10.MA0442.2.damo.fa", "profile_name": "SOX10", "synonyms": [ "DOM", "PCWH", "SOX-10", "SRY (sex determining region Y)-box 10", "SRY-box 10", "SRY-box transcription factor 10", "SRY-related HMG-box gene 10", "WS2E", "WS4", "WS4C", "dominant megacolon, mouse, human homolog of", "transcription factor SOX-10" ] } ] }, { "folder": "EXP035150.chondrosarcoma.SOX6", "tf_name": "SOX6", "samples": [ { "cell": { "title": "chondrosarcoma" }, "biological_condition": "" } ], "references": [ { "identifier": "PUBMED:26150426" }, { "identifier": "GEO:GSM1717476" }, { "identifier": "GEO:GSE70143" }, { "identifier": "GTRD:EXP035150" } ], "species": { "name": "Rattus norvegicus" }, "datasets": [ { "jaspar_id": "MA0515.1", "bed_filename": "macs/DAMO/EXP035150.chondrosarcoma.SOX6/EXP035150.chondrosarcoma.SOX6.MA0515.1.damo.bed", "fasta_filename": "macs/DAMO/EXP035150.chondrosarcoma.SOX6/EXP035150.chondrosarcoma.SOX6.MA0515.1.damo.fa", "profile_name": "Sox6", "synonyms": [ "AI987981", "SOX-LZ", "SRY (sex determining region Y)-box 6", "SRY-box containing gene 6", "transcription factor SOX-6" ] } ] }, { "folder": "EXP037917.liver.SP1", "tf_name": "SP1", "samples": [ { "cell": { "title": "liver" }, "biological_condition": "sham surgery, 14 days after surgery" } ], "references": [ { "identifier": "PUBMED:28440344" }, { "identifier": "GEO:GSM2339386" }, { "identifier": "GEO:GSE87730" }, { "identifier": "GTRD:EXP037917" } ], "species": { "name": "Rattus norvegicus" }, "datasets": [ { "jaspar_id": "MA0079.4", "bed_filename": "macs/DAMO/EXP037917.liver.SP1/EXP037917.liver.SP1.MA0079.4.damo.bed", "fasta_filename": "macs/DAMO/EXP037917.liver.SP1/EXP037917.liver.SP1.MA0079.4.damo.fa", "profile_name": "SP1", "synonyms": [ "Sp1 transcription factor", "specificity protein 1", "transcription factor Sp1" ] } ] }, { "folder": "EXP033402.H4-II-E_hepatocellular_carcinoma.TCF7L2", "tf_name": "TCF7L2", "samples": [ { "cell": { "title": "H4-II-E (hepatocellular carcinoma)" }, "biological_condition": "siRNA - Scrambled" } ], "references": [ { "identifier": "GEO:GSE53862" }, { "identifier": "PUBMED:25414334" }, { "identifier": "GEO:GSM1302276" }, { "identifier": "GEO:GSM1302275" }, { "identifier": "GTRD:EXP033402" } ], "species": { "name": "Rattus norvegicus" }, "datasets": [ { "jaspar_id": "MA0523.1", "bed_filename": "macs/DAMO/EXP033402.H4-II-E_hepatocellular_carcinoma.TCF7L2/EXP033402.H4-II-E_hepatocellular_carcinoma.TCF7L2.MA0523.1.damo.bed", "fasta_filename": "macs/DAMO/EXP033402.H4-II-E_hepatocellular_carcinoma.TCF7L2/EXP033402.H4-II-E_hepatocellular_carcinoma.TCF7L2.MA0523.1.damo.fa", "profile_name": "TCF7L2", "synonyms": [ "HMG box transcription factor 4", "T-cell factor 4", "T-cell-specific transcription factor 4", "TCF-4", "TCF4", "hTCF-4", "transcription factor 7 like 2", "transcription factor 7-like 2", "transcription factor 7-like 2 (T-cell specific, HMG-box)" ] } ] }, { "folder": "EXP033403.H4-II-E_hepatocellular_carcinoma.TCF7L2", "tf_name": "TCF7L2", "samples": [ { "cell": { "title": "H4-II-E (hepatocellular carcinoma)" }, "biological_condition": "siRNA -Tcf7l2" } ], "references": [ { "identifier": "GEO:GSM1302277" }, { "identifier": "GEO:GSE53862" }, { "identifier": "PUBMED:25414334" }, { "identifier": "GEO:GSM1302278" }, { "identifier": "GTRD:EXP033403" } ], "species": { "name": "Rattus norvegicus" }, "datasets": [ { "jaspar_id": "MA0523.1", "bed_filename": "macs/DAMO/EXP033403.H4-II-E_hepatocellular_carcinoma.TCF7L2/EXP033403.H4-II-E_hepatocellular_carcinoma.TCF7L2.MA0523.1.damo.bed", "fasta_filename": "macs/DAMO/EXP033403.H4-II-E_hepatocellular_carcinoma.TCF7L2/EXP033403.H4-II-E_hepatocellular_carcinoma.TCF7L2.MA0523.1.damo.fa", "profile_name": "TCF7L2", "synonyms": [ "HMG box transcription factor 4", "T-cell factor 4", "T-cell-specific transcription factor 4", "TCF-4", "TCF4", "hTCF-4", "transcription factor 7 like 2", "transcription factor 7-like 2", "transcription factor 7-like 2 (T-cell specific, HMG-box)" ] } ] }, { "folder": "EXP034509.oligodendrocyte_progenitors.TCF7L2", "tf_name": "TCF7L2", "samples": [ { "cell": { "title": "oligodendrocyte progenitors" }, "biological_condition": "T3 treated for 1 day" } ], "references": [ { "identifier": "GEO:GSM1587567" }, { "identifier": "GEO:GSE65119" }, { "identifier": "PUBMED:26955760" }, { "identifier": "GTRD:EXP034509" } ], "species": { "name": "Rattus norvegicus" }, "datasets": [ { "jaspar_id": "MA0523.1", "bed_filename": "macs/DAMO/EXP034509.oligodendrocyte_progenitors.TCF7L2/EXP034509.oligodendrocyte_progenitors.TCF7L2.MA0523.1.damo.bed", "fasta_filename": "macs/DAMO/EXP034509.oligodendrocyte_progenitors.TCF7L2/EXP034509.oligodendrocyte_progenitors.TCF7L2.MA0523.1.damo.fa", "profile_name": "TCF7L2", "synonyms": [ "HMG box transcription factor 4", "T-cell factor 4", "T-cell-specific transcription factor 4", "TCF-4", "TCF4", "hTCF-4", "transcription factor 7 like 2", "transcription factor 7-like 2", "transcription factor 7-like 2 (T-cell specific, HMG-box)" ] } ] }, { "folder": "EXP034510.oligodendrocyte_progenitors.TCF7L2", "tf_name": "TCF7L2", "samples": [ { "cell": { "title": "oligodendrocyte progenitors" }, "biological_condition": "T3 treated for 3 days" } ], "references": [ { "identifier": "GEO:GSM1587568" }, { "identifier": "PUBMED:26955760" }, { "identifier": "GEO:GSE65119" }, { "identifier": "GTRD:EXP034510" } ], "species": { "name": "Rattus norvegicus" }, "datasets": [ { "jaspar_id": "MA0523.1", "bed_filename": "macs/DAMO/EXP034510.oligodendrocyte_progenitors.TCF7L2/EXP034510.oligodendrocyte_progenitors.TCF7L2.MA0523.1.damo.bed", "fasta_filename": "macs/DAMO/EXP034510.oligodendrocyte_progenitors.TCF7L2/EXP034510.oligodendrocyte_progenitors.TCF7L2.MA0523.1.damo.fa", "profile_name": "TCF7L2", "synonyms": [ "HMG box transcription factor 4", "T-cell factor 4", "T-cell-specific transcription factor 4", "TCF-4", "TCF4", "hTCF-4", "transcription factor 7 like 2", "transcription factor 7-like 2", "transcription factor 7-like 2 (T-cell specific, HMG-box)" ] } ] } ] }