Datasets List
This API provides an easy-to-use REST web interface to query/retrieve data
from the UniBind database. The API comes with a human browsable interface and
also a programmatic interface which return the results in different formats,
including
json, jsonp, yaml,
bed, and also api for a browsable interface.
GET /api/v1/datasets/?collection=Robust&format=api&page=306&q=&species=10090&summary=true
{ "count": 3070, "next": "https://unibind.uio.no/api/v1/datasets/?collection=Robust&format=api&page=307&q=&species=10090&summary=true", "previous": "https://unibind.uio.no/api/v1/datasets/?collection=Robust&format=api&page=305&q=&species=10090&summary=true", "results": [ { "folder": "EXP037731.liver.XBP1", "tf_name": "XBP1", "samples": [ { "cell": { "title": "liver" }, "biological_condition": "" } ], "references": [ { "identifier": "PUBMED:28082079" }, { "identifier": "GEO:GSE86048" }, { "identifier": "GEO:GSM2292554" }, { "identifier": "GTRD:EXP037731" } ], "species": { "name": "Mus musculus" }, "datasets": [ { "jaspar_id": "MA0844.1", "bed_filename": "macs/DAMO/EXP037731.liver.XBP1/EXP037731.liver.XBP1.MA0844.1.damo.bed", "fasta_filename": "macs/DAMO/EXP037731.liver.XBP1/EXP037731.liver.XBP1.MA0844.1.damo.fa", "profile_name": "XBP1", "synonyms": [ "TREB-5", "TREB5", "X-box binding protein 1", "X-box-binding protein 1", "XBP-1", "XBP2", "tax-responsive element-binding protein 5" ] } ] }, { "folder": "EXP034849.embryonic_stem_cells.YY1", "tf_name": "YY1", "samples": [ { "cell": { "title": "embryonic stem cells" }, "biological_condition": "100 uM DRB under ES culture conditions for 30min" } ], "references": [ { "identifier": "PUBMED:26516199" }, { "identifier": "GEO:GSE68195" }, { "identifier": "GEO:GSM1665556" }, { "identifier": "GTRD:EXP034849" } ], "species": { "name": "Mus musculus" }, "datasets": [ { "jaspar_id": "MA0095.2", "bed_filename": "macs/DAMO/EXP034849.embryonic_stem_cells.YY1/EXP034849.embryonic_stem_cells.YY1.MA0095.2.damo.bed", "fasta_filename": "macs/DAMO/EXP034849.embryonic_stem_cells.YY1/EXP034849.embryonic_stem_cells.YY1.MA0095.2.damo.fa", "profile_name": "YY1", "synonyms": [ "DELTA", "GADEVS", "INO80 complex subunit S", "INO80S", "NF-E1", "UCRBP", "YIN-YANG-1", "YY-1", "YY1 transcription factor", "Yin and Yang 1 protein", "delta transcription factor", "transcriptional repressor protein YY1" ] } ] }, { "folder": "EXP034852.embryonic_stem_cells.YY1", "tf_name": "YY1", "samples": [ { "cell": { "title": "embryonic stem cells" }, "biological_condition": "1 uM DMSO for 6 hrs" } ], "references": [ { "identifier": "PUBMED:26516199" }, { "identifier": "GEO:GSM1665561" }, { "identifier": "GEO:GSE68195" }, { "identifier": "GTRD:EXP034852" } ], "species": { "name": "Mus musculus" }, "datasets": [ { "jaspar_id": "MA0095.2", "bed_filename": "macs/DAMO/EXP034852.embryonic_stem_cells.YY1/EXP034852.embryonic_stem_cells.YY1.MA0095.2.damo.bed", "fasta_filename": "macs/DAMO/EXP034852.embryonic_stem_cells.YY1/EXP034852.embryonic_stem_cells.YY1.MA0095.2.damo.fa", "profile_name": "YY1", "synonyms": [ "DELTA", "GADEVS", "INO80 complex subunit S", "INO80S", "NF-E1", "UCRBP", "YIN-YANG-1", "YY-1", "YY1 transcription factor", "Yin and Yang 1 protein", "delta transcription factor", "transcriptional repressor protein YY1" ] } ] }, { "folder": "EXP034853.embryonic_stem_cells.YY1", "tf_name": "YY1", "samples": [ { "cell": { "title": "embryonic stem cells" }, "biological_condition": "CDK7 inhibitor (10 uMTHZ1 for 6 hrs)" } ], "references": [ { "identifier": "GEO:GSM1665562" }, { "identifier": "PUBMED:26516199" }, { "identifier": "GEO:GSE68195" }, { "identifier": "GTRD:EXP034853" } ], "species": { "name": "Mus musculus" }, "datasets": [ { "jaspar_id": "MA0095.2", "bed_filename": "macs/DAMO/EXP034853.embryonic_stem_cells.YY1/EXP034853.embryonic_stem_cells.YY1.MA0095.2.damo.bed", "fasta_filename": "macs/DAMO/EXP034853.embryonic_stem_cells.YY1/EXP034853.embryonic_stem_cells.YY1.MA0095.2.damo.fa", "profile_name": "YY1", "synonyms": [ "DELTA", "GADEVS", "INO80 complex subunit S", "INO80S", "NF-E1", "UCRBP", "YIN-YANG-1", "YY-1", "YY1 transcription factor", "Yin and Yang 1 protein", "delta transcription factor", "transcriptional repressor protein YY1" ] } ] }, { "folder": "EXP034854.embryonic_stem_cells.YY1", "tf_name": "YY1", "samples": [ { "cell": { "title": "embryonic stem cells" }, "biological_condition": "1 uM Triptolide under ES culture condiction" } ], "references": [ { "identifier": "GEO:GSM1665563" }, { "identifier": "GEO:GSE68195" }, { "identifier": "PUBMED:26516199" }, { "identifier": "GTRD:EXP034854" } ], "species": { "name": "Mus musculus" }, "datasets": [ { "jaspar_id": "MA0095.2", "bed_filename": "macs/DAMO/EXP034854.embryonic_stem_cells.YY1/EXP034854.embryonic_stem_cells.YY1.MA0095.2.damo.bed", "fasta_filename": "macs/DAMO/EXP034854.embryonic_stem_cells.YY1/EXP034854.embryonic_stem_cells.YY1.MA0095.2.damo.fa", "profile_name": "YY1", "synonyms": [ "DELTA", "GADEVS", "INO80 complex subunit S", "INO80S", "NF-E1", "UCRBP", "YIN-YANG-1", "YY-1", "YY1 transcription factor", "Yin and Yang 1 protein", "delta transcription factor", "transcriptional repressor protein YY1" ] } ] }, { "folder": "EXP034855.embryonic_stem_cells.YY1", "tf_name": "YY1", "samples": [ { "cell": { "title": "embryonic stem cells" }, "biological_condition": "100 uM DRB under ES culture conditions for 30min" } ], "references": [ { "identifier": "GEO:GSE68195" }, { "identifier": "GEO:GSM1904538" }, { "identifier": "PUBMED:26516199" }, { "identifier": "GTRD:EXP034855" } ], "species": { "name": "Mus musculus" }, "datasets": [ { "jaspar_id": "MA0095.2", "bed_filename": "macs/DAMO/EXP034855.embryonic_stem_cells.YY1/EXP034855.embryonic_stem_cells.YY1.MA0095.2.damo.bed", "fasta_filename": "macs/DAMO/EXP034855.embryonic_stem_cells.YY1/EXP034855.embryonic_stem_cells.YY1.MA0095.2.damo.fa", "profile_name": "YY1", "synonyms": [ "DELTA", "GADEVS", "INO80 complex subunit S", "INO80S", "NF-E1", "UCRBP", "YIN-YANG-1", "YY-1", "YY1 transcription factor", "Yin and Yang 1 protein", "delta transcription factor", "transcriptional repressor protein YY1" ] } ] }, { "folder": "EXP034856.embryonic_stem_cells.YY1", "tf_name": "YY1", "samples": [ { "cell": { "title": "embryonic stem cells" }, "biological_condition": "shLuciferase" } ], "references": [ { "identifier": "GEO:GSE68195" }, { "identifier": "GEO:GSM1904541" }, { "identifier": "PUBMED:26516199" }, { "identifier": "GEO:GSM1904540" }, { "identifier": "GTRD:EXP034856" } ], "species": { "name": "Mus musculus" }, "datasets": [ { "jaspar_id": "MA0095.2", "bed_filename": "macs/DAMO/EXP034856.embryonic_stem_cells.YY1/EXP034856.embryonic_stem_cells.YY1.MA0095.2.damo.bed", "fasta_filename": "macs/DAMO/EXP034856.embryonic_stem_cells.YY1/EXP034856.embryonic_stem_cells.YY1.MA0095.2.damo.fa", "profile_name": "YY1", "synonyms": [ "DELTA", "GADEVS", "INO80 complex subunit S", "INO80S", "NF-E1", "UCRBP", "YIN-YANG-1", "YY-1", "YY1 transcription factor", "Yin and Yang 1 protein", "delta transcription factor", "transcriptional repressor protein YY1" ] } ] }, { "folder": "EXP059878.E14TG2A_embryonic_stem_cells.YY1", "tf_name": "YY1", "samples": [ { "cell": { "title": "E14TG2A (embryonic stem cells)" }, "biological_condition": "Conditions: cultured in EpiLSCs medium;" } ], "references": [ { "identifier": "PUBMED:31036938" }, { "identifier": "GEO:GSE92407" }, { "identifier": "GEO:GSM3615266" }, { "identifier": "GEO:GSM3615265" }, { "identifier": "GTRD:EXP059878" } ], "species": { "name": "Mus musculus" }, "datasets": [ { "jaspar_id": "MA0095.2", "bed_filename": "macs/DAMO/EXP059878.E14TG2A_embryonic_stem_cells.YY1/EXP059878.E14TG2A_embryonic_stem_cells.YY1.MA0095.2.damo.bed", "fasta_filename": "macs/DAMO/EXP059878.E14TG2A_embryonic_stem_cells.YY1/EXP059878.E14TG2A_embryonic_stem_cells.YY1.MA0095.2.damo.fa", "profile_name": "YY1", "synonyms": [ "DELTA", "GADEVS", "INO80 complex subunit S", "INO80S", "NF-E1", "UCRBP", "YIN-YANG-1", "YY-1", "YY1 transcription factor", "Yin and Yang 1 protein", "delta transcription factor", "transcriptional repressor protein YY1" ] } ] }, { "folder": "EXP000271.embryonic_stem_cells.YY1", "tf_name": "YY1", "samples": [ { "cell": { "title": "embryonic stem cells" }, "biological_condition": "" } ], "references": [ { "identifier": "GEO:GSM788496" }, { "identifier": "GEO:GSE31785" }, { "identifier": "PUBMED:22210892" }, { "identifier": "GTRD:EXP000271" } ], "species": { "name": "Mus musculus" }, "datasets": [ { "jaspar_id": "MA0095.2", "bed_filename": "macs/DAMO/EXP000271.embryonic_stem_cells.YY1/EXP000271.embryonic_stem_cells.YY1.MA0095.2.damo.bed", "fasta_filename": "macs/DAMO/EXP000271.embryonic_stem_cells.YY1/EXP000271.embryonic_stem_cells.YY1.MA0095.2.damo.fa", "profile_name": "YY1", "synonyms": [ "DELTA", "GADEVS", "INO80 complex subunit S", "INO80S", "NF-E1", "UCRBP", "YIN-YANG-1", "YY-1", "YY1 transcription factor", "Yin and Yang 1 protein", "delta transcription factor", "transcriptional repressor protein YY1" ] } ] }, { "folder": "EXP000357.V6_5_embryonic_stem_cells.YY1", "tf_name": "YY1", "samples": [ { "cell": { "title": "V6.5 (embryonic stem cells)" }, "biological_condition": "" } ], "references": [ { "identifier": "GEO:GSE25197" }, { "identifier": "GEO:GSM628031" }, { "identifier": "PUBMED:21170310" }, { "identifier": "GTRD:EXP000357" } ], "species": { "name": "Mus musculus" }, "datasets": [ { "jaspar_id": "MA0095.2", "bed_filename": "macs/DAMO/EXP000357.V6_5_embryonic_stem_cells.YY1/EXP000357.V6_5_embryonic_stem_cells.YY1.MA0095.2.damo.bed", "fasta_filename": "macs/DAMO/EXP000357.V6_5_embryonic_stem_cells.YY1/EXP000357.V6_5_embryonic_stem_cells.YY1.MA0095.2.damo.fa", "profile_name": "YY1", "synonyms": [ "DELTA", "GADEVS", "INO80 complex subunit S", "INO80S", "NF-E1", "UCRBP", "YIN-YANG-1", "YY-1", "YY1 transcription factor", "Yin and Yang 1 protein", "delta transcription factor", "transcriptional repressor protein YY1" ] } ] } ] }