Datasets List
This API provides an easy-to-use REST web interface to query/retrieve data
from the UniBind database. The API comes with a human browsable interface and
also a programmatic interface which return the results in different formats,
including
json, jsonp, yaml,
bed, and also api for a browsable interface.
GET /api/v1/datasets/?collection=Robust&format=api&page=305&q=&species=10090&summary=true
{ "count": 3070, "next": "https://unibind.uio.no/api/v1/datasets/?collection=Robust&format=api&page=306&q=&species=10090&summary=true", "previous": "https://unibind.uio.no/api/v1/datasets/?collection=Robust&format=api&page=304&q=&species=10090&summary=true", "results": [ { "folder": "EXP036519.motor_neurons.VSX2", "tf_name": "VSX2", "samples": [ { "cell": { "title": "motor neurons" }, "biological_condition": "" } ], "references": [ { "identifier": "GEO:GSE83872" }, { "identifier": "GEO:GSM2220207" }, { "identifier": "GTRD:EXP036519" } ], "species": { "name": "Mus musculus" }, "datasets": [ { "jaspar_id": "MA0726.1", "bed_filename": "macs/DAMO/EXP036519.motor_neurons.VSX2/EXP036519.motor_neurons.VSX2.MA0726.1.damo.bed", "fasta_filename": "macs/DAMO/EXP036519.motor_neurons.VSX2/EXP036519.motor_neurons.VSX2.MA0726.1.damo.fa", "profile_name": "VSX2", "synonyms": [ "CHX10", "HOX10", "MCOP2", "MCOPCB3", "RET1", "ceh-10 homeo domain containing homolog", "ceh-10 homeodomain-containing homolog", "homeobox protein CHX10", "visual system homeobox 2" ] } ] }, { "folder": "EXP051915.kidney.WT1", "tf_name": "WT1", "samples": [ { "cell": { "title": "kidney" }, "biological_condition": "Genotype: wildtype Age: E16.5 (developing stage) Strain: CFW" } ], "references": [ { "identifier": "GEO:GSE90016" }, { "identifier": "PUBMED:29377931" }, { "identifier": "GEO:GSM2395744" }, { "identifier": "GEO:GSM2867766" }, { "identifier": "GTRD:EXP051915" } ], "species": { "name": "Mus musculus" }, "datasets": [ { "jaspar_id": "MA1627.1", "bed_filename": "macs/DAMO/EXP051915.kidney.WT1/EXP051915.kidney.WT1.MA1627.1.damo.bed", "fasta_filename": "macs/DAMO/EXP051915.kidney.WT1/EXP051915.kidney.WT1.MA1627.1.damo.fa", "profile_name": "Wt1", "synonyms": null } ] }, { "folder": "EXP033044.kidney.WT1", "tf_name": "WT1", "samples": [ { "cell": { "title": "kidney" }, "biological_condition": "" } ], "references": [ { "identifier": "GEO:GSM1402806" }, { "identifier": "GEO:GSM1402807" }, { "identifier": "GEO:GSE58179" }, { "identifier": "GTRD:EXP033044" } ], "species": { "name": "Mus musculus" }, "datasets": [ { "jaspar_id": "MA1627.1", "bed_filename": "macs/DAMO/EXP033044.kidney.WT1/EXP033044.kidney.WT1.MA1627.1.damo.bed", "fasta_filename": "macs/DAMO/EXP033044.kidney.WT1/EXP033044.kidney.WT1.MA1627.1.damo.fa", "profile_name": "Wt1", "synonyms": null } ] }, { "folder": "EXP034362.kidney_cortex.WT1", "tf_name": "WT1", "samples": [ { "cell": { "title": "kidney cortex" }, "biological_condition": "" } ], "references": [ { "identifier": "GEO:GSM1563600" }, { "identifier": "GEO:GSE64063" }, { "identifier": "PUBMED:25636411" }, { "identifier": "GEO:GSM1563598" }, { "identifier": "GEO:GSM1563599" }, { "identifier": "GTRD:EXP034362" } ], "species": { "name": "Mus musculus" }, "datasets": [ { "jaspar_id": "MA1627.1", "bed_filename": "macs/DAMO/EXP034362.kidney_cortex.WT1/EXP034362.kidney_cortex.WT1.MA1627.1.damo.bed", "fasta_filename": "macs/DAMO/EXP034362.kidney_cortex.WT1/EXP034362.kidney_cortex.WT1.MA1627.1.damo.fa", "profile_name": "Wt1", "synonyms": null } ] }, { "folder": "EXP037732.liver.XBP1", "tf_name": "XBP1", "samples": [ { "cell": { "title": "liver" }, "biological_condition": "shXBP1 (7 days)" } ], "references": [ { "identifier": "PUBMED:28082079" }, { "identifier": "GEO:GSE86048" }, { "identifier": "GEO:GSM2292555" }, { "identifier": "GTRD:EXP037732" } ], "species": { "name": "Mus musculus" }, "datasets": [ { "jaspar_id": "MA0844.1", "bed_filename": "macs/DAMO/EXP037732.liver.XBP1/EXP037732.liver.XBP1.MA0844.1.damo.bed", "fasta_filename": "macs/DAMO/EXP037732.liver.XBP1/EXP037732.liver.XBP1.MA0844.1.damo.fa", "profile_name": "XBP1", "synonyms": [ "TREB-5", "TREB5", "X-box binding protein 1", "X-box-binding protein 1", "XBP-1", "XBP2", "tax-responsive element-binding protein 5" ] } ] }, { "folder": "EXP037733.liver.XBP1", "tf_name": "XBP1", "samples": [ { "cell": { "title": "liver" }, "biological_condition": "6h after partial hepatectomy" } ], "references": [ { "identifier": "GEO:GSM2292556" }, { "identifier": "PUBMED:28082079" }, { "identifier": "GEO:GSE86048" }, { "identifier": "GTRD:EXP037733" } ], "species": { "name": "Mus musculus" }, "datasets": [ { "jaspar_id": "MA0844.1", "bed_filename": "macs/DAMO/EXP037733.liver.XBP1/EXP037733.liver.XBP1.MA0844.1.damo.bed", "fasta_filename": "macs/DAMO/EXP037733.liver.XBP1/EXP037733.liver.XBP1.MA0844.1.damo.fa", "profile_name": "XBP1", "synonyms": [ "TREB-5", "TREB5", "X-box binding protein 1", "X-box-binding protein 1", "XBP-1", "XBP2", "tax-responsive element-binding protein 5" ] } ] }, { "folder": "EXP037734.liver.XBP1", "tf_name": "XBP1", "samples": [ { "cell": { "title": "liver" }, "biological_condition": "7d after XBP1 silencing and 6h after partial hepatectomy" } ], "references": [ { "identifier": "GEO:GSE86048" }, { "identifier": "PUBMED:28082079" }, { "identifier": "GEO:GSM2292557" }, { "identifier": "GTRD:EXP037734" } ], "species": { "name": "Mus musculus" }, "datasets": [ { "jaspar_id": "MA0844.1", "bed_filename": "macs/DAMO/EXP037734.liver.XBP1/EXP037734.liver.XBP1.MA0844.1.damo.bed", "fasta_filename": "macs/DAMO/EXP037734.liver.XBP1/EXP037734.liver.XBP1.MA0844.1.damo.fa", "profile_name": "XBP1", "synonyms": [ "TREB-5", "TREB5", "X-box binding protein 1", "X-box-binding protein 1", "XBP-1", "XBP2", "tax-responsive element-binding protein 5" ] } ] }, { "folder": "EXP037735.liver.XBP1", "tf_name": "XBP1", "samples": [ { "cell": { "title": "liver" }, "biological_condition": "48h after partial hepatectomy" } ], "references": [ { "identifier": "GEO:GSE86048" }, { "identifier": "PUBMED:28082079" }, { "identifier": "GEO:GSM2292558" }, { "identifier": "GTRD:EXP037735" } ], "species": { "name": "Mus musculus" }, "datasets": [ { "jaspar_id": "MA0844.1", "bed_filename": "macs/DAMO/EXP037735.liver.XBP1/EXP037735.liver.XBP1.MA0844.1.damo.bed", "fasta_filename": "macs/DAMO/EXP037735.liver.XBP1/EXP037735.liver.XBP1.MA0844.1.damo.fa", "profile_name": "XBP1", "synonyms": [ "TREB-5", "TREB5", "X-box binding protein 1", "X-box-binding protein 1", "XBP-1", "XBP2", "tax-responsive element-binding protein 5" ] } ] }, { "folder": "EXP037737.liver.XBP1", "tf_name": "XBP1", "samples": [ { "cell": { "title": "liver" }, "biological_condition": "6h after sham operation" } ], "references": [ { "identifier": "PUBMED:28082079" }, { "identifier": "GEO:GSE86048" }, { "identifier": "GEO:GSM2292560" }, { "identifier": "GTRD:EXP037737" } ], "species": { "name": "Mus musculus" }, "datasets": [ { "jaspar_id": "MA0844.1", "bed_filename": "macs/DAMO/EXP037737.liver.XBP1/EXP037737.liver.XBP1.MA0844.1.damo.bed", "fasta_filename": "macs/DAMO/EXP037737.liver.XBP1/EXP037737.liver.XBP1.MA0844.1.damo.fa", "profile_name": "XBP1", "synonyms": [ "TREB-5", "TREB5", "X-box binding protein 1", "X-box-binding protein 1", "XBP-1", "XBP2", "tax-responsive element-binding protein 5" ] } ] }, { "folder": "EXP037738.liver.XBP1", "tf_name": "XBP1", "samples": [ { "cell": { "title": "liver" }, "biological_condition": "48h after sham operation" } ], "references": [ { "identifier": "PUBMED:28082079" }, { "identifier": "GEO:GSE86048" }, { "identifier": "GEO:GSM2292561" }, { "identifier": "GTRD:EXP037738" } ], "species": { "name": "Mus musculus" }, "datasets": [ { "jaspar_id": "MA0844.1", "bed_filename": "macs/DAMO/EXP037738.liver.XBP1/EXP037738.liver.XBP1.MA0844.1.damo.bed", "fasta_filename": "macs/DAMO/EXP037738.liver.XBP1/EXP037738.liver.XBP1.MA0844.1.damo.fa", "profile_name": "XBP1", "synonyms": [ "TREB-5", "TREB5", "X-box binding protein 1", "X-box-binding protein 1", "XBP-1", "XBP2", "tax-responsive element-binding protein 5" ] } ] } ] }