Datasets List
This API provides an easy-to-use REST web interface to query/retrieve data
from the UniBind database. The API comes with a human browsable interface and
also a programmatic interface which return the results in different formats,
including
json, jsonp, yaml,
bed, and also api for a browsable interface.
GET /api/v1/datasets/?collection=Robust&format=api&page=3&q=&species=10090&summary=true
{ "count": 3070, "next": "https://unibind.uio.no/api/v1/datasets/?collection=Robust&format=api&page=4&q=&species=10090&summary=true", "previous": "https://unibind.uio.no/api/v1/datasets/?collection=Robust&format=api&page=2&q=&species=10090&summary=true", "results": [ { "folder": "EXP059376.embryonic_cortices.ARNT2", "tf_name": "ARNT2", "samples": [ { "cell": { "title": "embryonic cortices" }, "biological_condition": "Treatment: 2 kcl, uninfected Strain: C57BL/6J;" } ], "references": [ { "identifier": "GEO:GSE121660" }, { "identifier": "PUBMED:30846309" }, { "identifier": "GEO:GSM3442865" }, { "identifier": "GTRD:EXP059376" } ], "species": { "name": "Mus musculus" }, "datasets": [ { "jaspar_id": "MA1464.1", "bed_filename": "macs/DAMO/EXP059376.embryonic_cortices.ARNT2/EXP059376.embryonic_cortices.ARNT2.MA1464.1.damo.bed", "fasta_filename": "macs/DAMO/EXP059376.embryonic_cortices.ARNT2/EXP059376.embryonic_cortices.ARNT2.MA1464.1.damo.fa", "profile_name": "ARNT2", "synonyms": [ "ARNT protein 2", "WEDAS", "aryl hydrocarbon receptor nuclear translocator 2", "bHLHe1", "class E basic helix-loop-helix protein 1" ] } ] }, { "folder": "EXP059377.embryonic_cortices.ARNT2", "tf_name": "ARNT2", "samples": [ { "cell": { "title": "embryonic cortices" }, "biological_condition": "Treatment: 2kcl, uninfected; Strain: C57BL/6J;" } ], "references": [ { "identifier": "GEO:GSE121660" }, { "identifier": "PUBMED:30846309" }, { "identifier": "GEO:GSM3442866" }, { "identifier": "GTRD:EXP059377" } ], "species": { "name": "Mus musculus" }, "datasets": [ { "jaspar_id": "MA1464.1", "bed_filename": "macs/DAMO/EXP059377.embryonic_cortices.ARNT2/EXP059377.embryonic_cortices.ARNT2.MA1464.1.damo.bed", "fasta_filename": "macs/DAMO/EXP059377.embryonic_cortices.ARNT2/EXP059377.embryonic_cortices.ARNT2.MA1464.1.damo.fa", "profile_name": "ARNT2", "synonyms": [ "ARNT protein 2", "WEDAS", "aryl hydrocarbon receptor nuclear translocator 2", "bHLHe1", "class E basic helix-loop-helix protein 1" ] } ] }, { "folder": "EXP059382.embryonic_cortices.ARNT2", "tf_name": "ARNT2", "samples": [ { "cell": { "title": "embryonic cortices" }, "biological_condition": "Treatment: 0kcl, ctlshrna; Strain: C57BL/6J;" } ], "references": [ { "identifier": "PUBMED:30846309" }, { "identifier": "GEO:GSE121660" }, { "identifier": "GEO:GSM3442871" }, { "identifier": "GTRD:EXP059382" } ], "species": { "name": "Mus musculus" }, "datasets": [ { "jaspar_id": "MA1464.1", "bed_filename": "macs/DAMO/EXP059382.embryonic_cortices.ARNT2/EXP059382.embryonic_cortices.ARNT2.MA1464.1.damo.bed", "fasta_filename": "macs/DAMO/EXP059382.embryonic_cortices.ARNT2/EXP059382.embryonic_cortices.ARNT2.MA1464.1.damo.fa", "profile_name": "ARNT2", "synonyms": [ "ARNT protein 2", "WEDAS", "aryl hydrocarbon receptor nuclear translocator 2", "bHLHe1", "class E basic helix-loop-helix protein 1" ] } ] }, { "folder": "EXP059447.hippocampus.ARNT2", "tf_name": "ARNT2", "samples": [ { "cell": { "title": "hippocampus" }, "biological_condition": "Treatment: 0 ka (kainic acid), uninfected; Strain: C57BL/6J; Age: adult;" } ], "references": [ { "identifier": "GEO:GSE121660" }, { "identifier": "GEO:GSM3442879" }, { "identifier": "PUBMED:30846309" }, { "identifier": "GEO:GSM3442880" }, { "identifier": "GTRD:EXP059447" } ], "species": { "name": "Mus musculus" }, "datasets": [ { "jaspar_id": "MA1464.1", "bed_filename": "macs/DAMO/EXP059447.hippocampus.ARNT2/EXP059447.hippocampus.ARNT2.MA1464.1.damo.bed", "fasta_filename": "macs/DAMO/EXP059447.hippocampus.ARNT2/EXP059447.hippocampus.ARNT2.MA1464.1.damo.fa", "profile_name": "ARNT2", "synonyms": [ "ARNT protein 2", "WEDAS", "aryl hydrocarbon receptor nuclear translocator 2", "bHLHe1", "class E basic helix-loop-helix protein 1" ] } ] }, { "folder": "EXP059448.hippocampus.ARNT2", "tf_name": "ARNT2", "samples": [ { "cell": { "title": "hippocampus" }, "biological_condition": "Treatment: 2 ka (kainic acid), uninfected; Strain: C57BL/6J; Age: adult;" } ], "references": [ { "identifier": "GEO:GSM3442882" }, { "identifier": "GEO:GSE121660" }, { "identifier": "PUBMED:30846309" }, { "identifier": "GEO:GSM3442881" }, { "identifier": "GTRD:EXP059448" } ], "species": { "name": "Mus musculus" }, "datasets": [ { "jaspar_id": "MA1464.1", "bed_filename": "macs/DAMO/EXP059448.hippocampus.ARNT2/EXP059448.hippocampus.ARNT2.MA1464.1.damo.bed", "fasta_filename": "macs/DAMO/EXP059448.hippocampus.ARNT2/EXP059448.hippocampus.ARNT2.MA1464.1.damo.fa", "profile_name": "ARNT2", "synonyms": [ "ARNT protein 2", "WEDAS", "aryl hydrocarbon receptor nuclear translocator 2", "bHLHe1", "class E basic helix-loop-helix protein 1" ] } ] }, { "folder": "EXP036940.NIH_3T3_embryonic_fibroblasts.ARNTL", "tf_name": "ARNTL", "samples": [ { "cell": { "title": "NIH 3T3 (embryonic fibroblasts)" }, "biological_condition": "dexamethasone synchronized" } ], "references": [ { "identifier": "GEO:GSE61775" }, { "identifier": "GEO:GSM1513746" }, { "identifier": "GTRD:EXP036940" } ], "species": { "name": "Mus musculus" }, "datasets": [ { "jaspar_id": "MA0603.1", "bed_filename": "macs/DAMO/EXP036940.NIH_3T3_embryonic_fibroblasts.ARNTL/EXP036940.NIH_3T3_embryonic_fibroblasts.ARNTL.MA0603.1.damo.bed", "fasta_filename": "macs/DAMO/EXP036940.NIH_3T3_embryonic_fibroblasts.ARNTL/EXP036940.NIH_3T3_embryonic_fibroblasts.ARNTL.MA0603.1.damo.fa", "profile_name": "Arntl", "synonyms": [ "Arnt3", "BMAL1b", "Bmal1", "MOP3", "aryl hydrocarbon receptor nuclear translocator-like", "aryl hydrocarbon receptor nuclear translocator-like protein 1", "bHLHe5", "bmal1b'", "brain and muscle ARNT-like 1" ] } ] }, { "folder": "EXP036942.NIH_3T3_embryonic_fibroblasts.ARNTL", "tf_name": "ARNTL", "samples": [ { "cell": { "title": "NIH 3T3 (embryonic fibroblasts)" }, "biological_condition": "dexamethasone synchronized" } ], "references": [ { "identifier": "GEO:GSE61775" }, { "identifier": "GEO:GSM1513748" }, { "identifier": "GTRD:EXP036942" } ], "species": { "name": "Mus musculus" }, "datasets": [ { "jaspar_id": "MA0603.1", "bed_filename": "macs/DAMO/EXP036942.NIH_3T3_embryonic_fibroblasts.ARNTL/EXP036942.NIH_3T3_embryonic_fibroblasts.ARNTL.MA0603.1.damo.bed", "fasta_filename": "macs/DAMO/EXP036942.NIH_3T3_embryonic_fibroblasts.ARNTL/EXP036942.NIH_3T3_embryonic_fibroblasts.ARNTL.MA0603.1.damo.fa", "profile_name": "Arntl", "synonyms": [ "Arnt3", "BMAL1b", "Bmal1", "MOP3", "aryl hydrocarbon receptor nuclear translocator-like", "aryl hydrocarbon receptor nuclear translocator-like protein 1", "bHLHe5", "bmal1b'", "brain and muscle ARNT-like 1" ] } ] }, { "folder": "EXP038301.embryonic_fibroblasts.ARNTL", "tf_name": "ARNTL", "samples": [ { "cell": { "title": "embryonic fibroblasts" }, "biological_condition": "EtOH" } ], "references": [ { "identifier": "GEO:GSM2450977" }, { "identifier": "PUBMED:27688755" }, { "identifier": "GEO:GSM2450976" }, { "identifier": "GEO:GSE93318" }, { "identifier": "GTRD:EXP038301" } ], "species": { "name": "Mus musculus" }, "datasets": [ { "jaspar_id": "MA0603.1", "bed_filename": "macs/DAMO/EXP038301.embryonic_fibroblasts.ARNTL/EXP038301.embryonic_fibroblasts.ARNTL.MA0603.1.damo.bed", "fasta_filename": "macs/DAMO/EXP038301.embryonic_fibroblasts.ARNTL/EXP038301.embryonic_fibroblasts.ARNTL.MA0603.1.damo.fa", "profile_name": "Arntl", "synonyms": [ "Arnt3", "BMAL1b", "Bmal1", "MOP3", "aryl hydrocarbon receptor nuclear translocator-like", "aryl hydrocarbon receptor nuclear translocator-like protein 1", "bHLHe5", "bmal1b'", "brain and muscle ARNT-like 1" ] } ] }, { "folder": "EXP038302.embryonic_fibroblasts.ARNTL", "tf_name": "ARNTL", "samples": [ { "cell": { "title": "embryonic fibroblasts" }, "biological_condition": "4-OHT" } ], "references": [ { "identifier": "GEO:GSM2450979" }, { "identifier": "PUBMED:27688755" }, { "identifier": "GEO:GSE93318" }, { "identifier": "GEO:GSM2450978" }, { "identifier": "GTRD:EXP038302" } ], "species": { "name": "Mus musculus" }, "datasets": [ { "jaspar_id": "MA0603.1", "bed_filename": "macs/DAMO/EXP038302.embryonic_fibroblasts.ARNTL/EXP038302.embryonic_fibroblasts.ARNTL.MA0603.1.damo.bed", "fasta_filename": "macs/DAMO/EXP038302.embryonic_fibroblasts.ARNTL/EXP038302.embryonic_fibroblasts.ARNTL.MA0603.1.damo.fa", "profile_name": "Arntl", "synonyms": [ "Arnt3", "BMAL1b", "Bmal1", "MOP3", "aryl hydrocarbon receptor nuclear translocator-like", "aryl hydrocarbon receptor nuclear translocator-like protein 1", "bHLHe5", "bmal1b'", "brain and muscle ARNT-like 1" ] } ] }, { "folder": "EXP052187.peritoneal_macrophages.ARNTL", "tf_name": "ARNTL", "samples": [ { "cell": { "title": "peritoneal macrophages" }, "biological_condition": "Treatment: LPS (bacterial lipopolysaccharide) 0hr Strain: C57BL/6J Source: mouse peritoneal macrophage" } ], "references": [ { "identifier": "GEO:GSM2522477" }, { "identifier": "PUBMED:28765524" }, { "identifier": "GEO:GSE95712" }, { "identifier": "GTRD:EXP052187" } ], "species": { "name": "Mus musculus" }, "datasets": [ { "jaspar_id": "MA0603.1", "bed_filename": "macs/DAMO/EXP052187.peritoneal_macrophages.ARNTL/EXP052187.peritoneal_macrophages.ARNTL.MA0603.1.damo.bed", "fasta_filename": "macs/DAMO/EXP052187.peritoneal_macrophages.ARNTL/EXP052187.peritoneal_macrophages.ARNTL.MA0603.1.damo.fa", "profile_name": "Arntl", "synonyms": [ "Arnt3", "BMAL1b", "Bmal1", "MOP3", "aryl hydrocarbon receptor nuclear translocator-like", "aryl hydrocarbon receptor nuclear translocator-like protein 1", "bHLHe5", "bmal1b'", "brain and muscle ARNT-like 1" ] } ] } ] }